СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2022 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2021 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2020 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2019 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2018 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2017 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2016 ГОД
СПИСОК ПУБЛИКАЦИЙ СОТРУДНИКОВ ФИЦ БИОТЕХНОЛОГИИ ЗА 2015 ГОД
АРХИВ ПУБЛИКАЦИЙ СОТРУДНИКОВ ИНБИ РАН (1993-2014 гг)
Избранные публикации сотрудников ФИЦ Биотехнологии РАН
в журналах, индексируемых БД Web of Science (WoS):
- Yakovleva I.V., Kamionskaya A.M. State of the art: Russia starts genome-edited plant assessment. Trends in Biotechnology. 2022, v. 40, # 6, pp. 635-638, doi:10.1016/j.tibtech.2021.12.004.
- Daria Marakulina, Ilya E Vorontsov, Ivan V Kulakovskiy, Andreas Lennartsson, Finn Drabløs, Yulia A Medvedeva. EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexes. Nucleic Acids Research. 2022, # gkac9891-7, doi:10.1093/nar/gkac989.
- de Rink R., Lavender M.B., Liu D., Klok J.B.M., Sorokin D.Y., Buisman C.J.N., ter Heijne A. Continuous electron shuttling by sulfide oxidizing bacteria as a novel strategy to produce electric current. Journal of Hazardous Materials. 2022, v. 424 Part A, pp. 2174581-19, doi:10.1016/j.jhazmat.2021.127358.
- Yanzeng Li, Zhou Chen, Yanyan Peng, Weizhao Huang, Junxiao Liu, Vladimir Mironov, Shenghua Zhang. Deeper insights into the effects of substrate to inoculum ratio selection on the relationship of kinetic parameters, microbial communities, and key metabolic pathways during the anaerobic digestion of food waste. Water Research. 2022, v. 217, pp. 1184401-12, doi:10.1016/j.watres.2022.118440.
- Ivanov A.V., Safenkova I.V., Zherdev A.V., Dzantiev B.B. DIRECT2: A novel platform for CRISPR–Cas12-based assay comprising universal DNA-IgG probe and a direct lateral flow test. Biosensors and Bioelectronics. 2022, v. 208, pp. 1142271-8, doi:10.1016/j.bios.2022.114227.
- Sorokin D.Y., Merkel A.Y., Messina E., Tugui C., Pabst M., Golyshin P.N., Yakimov M.M. Anaerobic carboxydotrophy in sulfur-respiring haloarchaea from hypersaline lakes. ISME Journal. 2022, v. 16, pp. 1534-1546, doi:10.1038/s41396-022-01206-x.
- Zhou Chen, Yanzeng Li, Yanyan Peng, Vladimir Mironov, Jinxi Chen, Huixia Jin, Shenghua Zhang. Feasibility of sewage sludge and food waste aerobic co-composting: Physicochemical properties, microbial community structures, and contradiction between microbial metabolic activity and safety risks. Science of the Total Environment. 2022, v. 825, pp. 1540471-10, doi:10.1016/j.scitotenv.2022.154047.
- Zhuravleva E. A., Shekhurdina S. V., Kotova I. B., Loiko N. G., Popova N. M., Kryukov E., Kovalev A. A., Kovalev D. A., Litti Y. V. Effects of various materials used to promote the direct interspecies electron transfer on anaerobic digestion of low-concentration swine manure. Science of the Total Environment. 2022, v. 839, # 15, pp. 1560731-15, doi:10.1016/j.scitotenv.2022.156073.
- Alexey Lunkov, Balzhima Shagdarova, Tatiana Lyalina, Maxim A. Dubinnyi, Natalia Karpova, Sergey Lopatin, Alla Il’ina, Valery Varlamov. Simple method for ultrasound assisted «click» modification of azido-chitosan derivatives by CuAAC. Carbohydrate Polymers. 2022, v. 282, pp. 1191091-13, doi:10.1016/j.carbpol.2022.119109.
- Alimbarova L, Egorova A, Riabova O, Monakhova N, Makarov V. A proof-of-concept study for the efficacy of dispirotripiperazine PDSTP in a rabbit model of herpes simplex epithelial keratitis. Antiviral Research. 2022, v. 202, pp. 1053271-4, doi:10.1016/j.antiviral.2022.105327.
- Dohme A., Knoblauch M., Egorova A., Makarov V., Bogner E. Broad-spectrum antiviral diazadispiroalkane core molecules block attachment and cell-to-cell spread of herpesviruses. Antiviral Research. 2022, v. 206, pp. 1054021-12, doi:10.1016/j.antiviral.2022.105402.
- Maxim Muravyov, Anna Panyushkina, Natalya Fomchenko. Bulk flotation followed by selective leaching with biogenic ferric iron is a promising solution for eco-friendly processing of complex sulfidic ores. Journal of Environmental Management. 2022, v. 318, pp. 1155871-9, doi:10.1016/j.jenvman.2022.115587.
- A.A. Kovalev, D.A. Kovalev, E.A. Zhuravleva, I. V. Katraeva, V. Panchenko, U. Fiore, Y.V. Litti. Two-stage anaerobic digestion with direct electric stimulation of methanogenesis: The effect of a physical barrier to retain biomass on the surface of a carbon cloth-based biocathode. Renewable Energy. 2022, v. 181, pp. 966-977, doi:10.1016/j.renene.2021.09.097.
- Nikolai N. Sluchanko, Yury B. Slonimskiy, Nikita A. Egorkin, Larisa A. Varfolomeeva, Yaroslav V. Faletrov, Anastasia M. Moysenovich, Evgenia Yu. Parshina, Thomas Friedrich, Eugene G. Maksimov, Konstantin M. Boyko, Vladimir O. Popov. Silkworm carotenoprotein as an efficient carotenoid extractor, solubilizer and transporter. International Journal of Biological Macromolecules. 2022, v. 223, pp. 1381-1393, doi:10.1016/j.ijbiomac.2022.11.093.
- Yury B Slonimskiy, A. Egorkin Nikita, Aleksandr A Ashikhmin, Thomas Friedrich, Eugene G Maksimov, Nikolai N Sluchanko. Reconstitution of the functional Carotenoid-Binding Protein from silkworm in E. coli. International Journal of Biological Macromolecules. 2022, v. 214, pp. 664-671, doi:10.1016/j.ijbiomac.2022.06.135.
- Eronina TB, Mikhaylova VV, Chebotareva NA, Kleymenov SY, Pivovarova AV, Kurganov BI. Combined action of chemical chaperones on stability, aggregation and oligomeric state of muscle glycogen phosphorylase b. International Journal of Biological Macromolecules. 2022, v. 203, pp. 406-416, doi:10.1016/j.ijbiomac.2022.01.106.
- Slonimskiy Y.B., Zupnik A.O., Varfolomeeva L.A., Boyko K.M., Maksimov E.G., Sluchanko N.N. A primordial Orange Carotenoid Protein: structure, photoswitching activity and evolutionary aspects. International Journal of Biological Macromolecules. 2022, v. 222, pp. 167-180, doi:10.1016/j.ijbiomac.2022.09.131.
- Kosmachevskaya O.V., Nasybullina E.I., Pugachenko I.S., Novikova N.N., Topunov A.F. Antiglycation and Antioxidant Effect of Nitroxyl towards Hemoglobin. Antioxidants. 2022, v. 11, # 10, pp. 20071-20, doi:10.3390/antiox11102007.
- Karaeva J. V., Timofeeva S. S., Kovalev A. A., Kovalev D. A., Gilfanov M. F., Grigoriev V. S., Litti Y. V. CO-PYROLYSIS of agricultural waste and estimation of the applicability of pyrolysis in the integrated technology of biorenewable hydrogen production. International Journal of Hydrogen Energy. 2022, v. 47, # 23, pp. 11787-11798, doi:10.1016/j.ijhydene.2022.02.057.
- Kovalev A.A., Kovalev D.A., Panchenko V.A., Zhuravleva E.A., Laikova А.А., Shekhurdina S.V., Vivekanand V., Litti Y. V. Approbation of an innovative method of pretreatment of dark fermentation feedstocks. International Journal of Hydrogen Energy. 2022, v. 47, # 78, pp. 33272-33281, doi:10.1016/j.ijhydene.2022.08.051.
- Litti Y. V., Potekhina M. A., Zhuravleva E. A., Vishnyakova A. V., Gruzdev D. S., Kovalev A. A., Kovalev D.A., Katraeva I.V., Parshina S. N. Dark fermentative hydrogen production from simple sugars and various wastewaters by a newly isolated Thermoanaerobacterium thermosaccharolyticum SP-H2. International Journal of Hydrogen Energy. 2022, v. 47, # 58, pp. 24310-24327, doi:10.1016/j.ijhydene.2022.05.235.
- Mikheeva E. R., Katraeva I. V., Kovalev A. A., Kovalev D. A., Litti Y. V. Effects of pretreatment in a vortex layer apparatus on the properties of confectionery wastewater and its dark fermentation. International Journal of Hydrogen Energy. 2022, v. 47, # 55, pp. 23165-23174, doi:10.1016/j.ijhydene.2022.05.183.
- Mikheeva E. R., Katraeva I. V., Vorozhtsov D. L., Kovalev D. A., Kovalev A. A., Grigoriev V. S., Litti Y. V. Dark fermentative biohydrogen production from confectionery wastewater in continuous-flow reactor. International Journal of Hydrogen Energy. 2022, v. 47, # 53, pp. 22348-22358, doi:10.1016/j.ijhydene.2022.05.131.
- Глазунова О.А., Моисеенко К.В., Савинова О.С., Федорова Т.В. In Vitro and In Vivo Antihypertensive Effect of Milk Fermented with Different Strains of Common Starter Lactic Acid Bacteria. Nutrients. 2022, v. 14, # 24, pp. 53571-18, doi:10.3390/nu14245357.
- Hendrickson O.D., Zvereva E.A., Dzantiev B.B., Zherdev A.V. Ultrasensitive lateral flow immunoassay of phycotoxin microcystin-LR in seafood based on magnetic particles and peroxidase signal amplification. Food Control. 2022, v. 1333сPart B, pp. 1086551-10, doi:10.1016/j.foodcont.2021.108655.
- Safenkova I.V., Burkin K.M., Bodulev O.L., Razo S.C., Ivanov A.V., Zherdev A.V., Dzantiev B.B., Sakharov I.Yu. Comparative study of magnetic beads and microplates as supports in heterogeneous amplified assay of miRNA-141 by using mismatched catalytic hairpin assembly reaction. Talanta. 2022, v. 247, pp. 1235351-7, doi:10.1016/j.talanta.2022.123535.
- Maria Sinegubova, Ivan Vorobiev, Anatoly Klishin, Dmitry Eremin, Nadezhda Orlova, Natalya Orlova, Mikhail Polzikov. Purification Process of a Recombinant Human Follicle Stimulating Hormone Biosimilar (Primapur®) to Yield a Pharmaceutical Product with High Batch-to-Batch Consistency. Pharmaceutics. 2022, v. 14, # 1, pp. 961-21, doi:10.3390/pharmaceutics14010096.
- Igor B. Levshin, Alexander Y. Simonov, Sergey N. Lavrenov, Alexey A. Panov, Natalia E. Grammatikova, Alexander I. Alexandrov, Eslam S. M. O. Ghazy, Nikita A. Savin, Peter V. Gorelkin, Alexander S. Erofeev, Vladimir I. Polshakov. Antifungal Thiazolidines: Synthesis and Biological Evaluation of Mycosidine Congeners. Pharmaceutics. 2022, v. 15, # 5, pp. 5631-23, doi:10.3390/ph15050563.
- Alexander A. Zhgun, Mikhail A. Eldarov. Spermidine and 1,3‐Diaminopropane Have Opposite Effects on the Final Stage of Cephalosporin C Biosynthesis in High‐Yielding Acremonium chrysogenum Strain. International Journal of Molecular Sciences. 2022, v. 23, # 23, pp. 146251-25, doi:10.3390/ijms232314625.
- Alexandra V. Gavshina, Ilya.D. Solovyev, Alexander P. Savitsky. The Role of the 145 Residue in Photochemical Properties of the Biphotochromic Protein mSAASoti: Brightness versus Photoconversion. International Journal of Molecular Sciences. 2022, v. 23, # 24, pp. 160581-9, doi:10.3390/ijms232416058.
- Ekaterina I. Romanova, Anatoliy V. Zubritskiy, Anna V. Lioznova, Adewale J. Ogunleye, Vasily A. Golotin, Anna A. Guts, Andreas Lennartsson, Oleg N. Demidov, Yulia A. Medvedeva. RUNX1/CEBPA Mutation in Acute Myeloid Leukemia Promotes Hypermethylation and Indicates for Demethylation Therapy. International Journal of Molecular Sciences. 2022, v. 23, # 19, pp. 114131-11, doi:10.3390/ijms231911413.
- Ekaterina Ilgova, Simon Galkin, Maria Khrenova, Marina Serebryakova, Marina Gottikh, Andrey Anisenko. Complex of HIV-1 Integrase with Cellular Ku Protein: Interaction Interface and Search for Inhibitors. International Journal of Molecular Sciences. 2022, v. 23, # 6, pp. 29081-17, doi:10.3390/ijms23062908.
- Pavel Pechenov, Danil A. Garagulya, Daniil S. Stanovov, Andrey V. Letarov. New Effective Method of Lactococcus Genome Editing Using Guide RNA-Directed Transposition. International Journal of Molecular Sciences. 2022, v. 23, # 22, pp. 139781-10, doi:10.3390/ijms232213978.
- Rashit I. Tarakanov, Anna A. Lukianova, Peter V. Evseev, Roksana I. Pilik, Anna D. Tokmakova, Eugene E. Kulikov, Stepan V. Toshchakov, Alexander N. Ignatov, Fevzi S.-U. Dzhalilov, Konstantin A. Miroshnikov. Ayka, a Novel Curtobacterium Bacteriophage, Provides Protection against Soybean Bacterial Wilt and Tan Spot. International Journal of Molecular Sciences. 2022, v. 23, # 18, pp. 109131-18, doi:10.3390/ijms231810913.
- Borzova VA, Roman SG, Pivovarova AV, Chebotareva NA. Effects of Molecular Crowding and Betaine on HSPB5 Interactions, with Target Proteins Differing in the Quaternary Structure and Aggregation Mechanism. International Journal of Molecular Sciences. 2022, v. 23, # 23, pp. 153921-22, doi:10.3390/ijms232315392.
- Britikov V.V., Bocharov E.V., Britikova E.V., Dergousova N.I., Kulikova O.G., Solovieva A.Y., Shipkov N.S., Varfolomeeva L.A., Tikhonova T.V., Timofeev V.I., Shtykova E.V., Altukhov D.A., Usanov S.A., Arseniev A.S., Rakitina T.V., Popov V.O. Unusual Cytochrome c552 from Thioalkalivibrio paradoxus: Solition NMR structure and interaction with Thiocyanate dehydrogenase. International Journal of Molecular Sciences. 2022, v. 23, # 17, pp. 99691-25, doi:10.3390/ijms23179969.
- Buglak AA, Kapitonova MA, Vechtomova YL, Telegina TA. Insights into Molecular Structure of Pterins Suitable for Biomedical Applications. International Journal of Molecular Sciences. 2022, v. 23, # 23, pp. 152221-50, doi:10.3390/ijms232315222.
- Efimov AD, Golomidova AK, Kulikov EE, Belalov IS, Ivanov PA, Letarov AV. RB49-like Bacteriophages Recognize O Antigens as One of the Alternative Primary Receptors. International Journal of Molecular Sciences. 2022, v. 23, # 19, pp. 113291-17, doi:10.3390/ijms231911329.
- Eronina TB, Mikhaylova VV, Chebotareva NA, Tugaeva KV, Kurganov BI. Effect of Betaine and Arginine on Interaction of αB-Crystallin with Glycogen Phosphorylase b. International Journal of Molecular Sciences. 2022, v. 23, # 7, pp. 38161-18, doi:10.3390/ijms23073816.
- Grigorenko V.G., Khrenova M.G., Andreeva I.P., Rubtsova M.Y., Lev A.I., Novikova T.S., Detusheva E.V., Fursova N.K., Dyatlov I.A., Egorov A.M. Drug Repurposing of the Unithiol: Inhibition of Metallo-β-Lactamases for the Treatment of Carbapenem-Resistant Gram-Negative Bacterial Infections. International Journal of Molecular Sciences. 2022, v. 23, # 3, pp. 18341-16, doi:10.3390/ijms23031834.
- Grosfeld EV, Zhigarkov VS, Alexandrov AI, Minaev NV, Yusupov VI. Theoretical and Experimental Assay of Shock Experienced by Yeast Cells during Laser Bioprinting. International Journal of Molecular Sciences. 2022, v. 23, # 17, pp. 98231-15, doi:10.3390/ijms23179823.
- Khrenova M.G., Panova T.V., Rodin V.A., Kryakvin M.A., Lukyanov D.A., Osterman I.A., Zvereva M.I. Nanopore Sequencing for De Novo Bacterial Genome Assembly and Search for Single-Nucleotide Polymorphism. International Journal of Molecular Sciences. 2022, v. 23, # 15, pp. 85691-13, doi:10.3390/ijms23158569.
- Kulakova MV, Karginov AV, Alexandrov AI, Agaphonov MO. The GEM-GECO Calcium Indicator Is Useable in Ogataea parapolymorpha Yeast, but Aggravates Effects of Increased Cytosolic Calcium Levels. International Journal of Molecular Sciences. 2022, v. 23, # 17, pp. 100041-11, doi:10.3390/ijms231710004.
- Kushnirov, Dergalev A.A., Alieva M.K., Alexandrov A.I. Structural Bases of Prion Variation in Yeast. International Journal of Molecular Sciences. 2022, v. 23, # 10, pp. 57381-20, doi:10.3390/ijms23105738.
- Mardanova E.S., Kotlyarov R.Y., Stuchinskaya M.D., Nikolaeva L.I., Zahmanova G., Ravin N.V. High-Yield Production of Chimeric Hepatitis E Virus-Like Particles Bearing the M2e Influenza Epitope and Receptor Binding Domain of SARS-CoV-2 in Plants Using Viral Vectors. International Journal of Molecular Sciences. 2022, v. 23, # 24, pp. 156841-17, doi:10.3390/ijms232415684.
- Maslova O, Mindlin S, Beletsky A, Mardanov A, Petrova M. Plasmids as key players in Acinetobacter adaptation. International Journal of Molecular Sciences. 2022, v. 23, # 18, pp. 23108931-11, doi:10.3390/ijms231810893.
- Mijanović O., Jakovleva A., Branković A., Zdravkova K., Pualic M., Belozerskaya T.A., Nikitkina A.I., Parodi A., Zamyatnin A.A. Jr. Cathepsin K in Pathological Conditions and New Therapeutic and Diagnostic Perspectives. International Journal of Molecular Sciences. 2022, v. 23, # 22, pp. 137621-17, doi:10.3390/ijms232213762.
- Muntyan M.S., Viryasov M.B., Sorokin D.Y., Skulachev V.P. Sodium energetic cycle in the natronophilic bacterium Thioalkalivibrio versutus. International Journal of Molecular Sciences. 2022, v. 23, # 4, pp. 19651-12, doi:10.3390/ijms23041965.
- Nefedova V.V., Kopylova G.V., Shchepkin D.V., Kochurova A.M., Kechko O.I., Borzova V.A., Ryabkova N.S., Katrukha I.A., Mitkevich V.A., Bershitsky S.Y., Levitsky D.I., Matyushenko A.M. Impact of Troponin in Cardiomyopathy Development Caused by Mutations in Tropomyosin. International Journal of Molecular Sciences. 2022, v. 23, # 24, pp. 157231-18, doi:10.3390/ijms232415723.
- Ravin N.V, Rudenko T.S, Smolyakov D.D, Beletsky A.V, Gureeva M.V, Samylina O.S, Grabovich M.Y. History of the study of the genus Thiothrix: from the first enrichment cultures to pangenomic analysis. International Journal of Molecular Sciences. 2022, v. 23, # 17, pp. 95311-11, doi:10.3390/ijms23179531.
- Samokhvalov A.V., Safenkova I.V., Eremin S.A., Bonchuk A.N., Maximenko O.G., Sluchanko N.N., Zherdev A.V., Dzantiev B.B. Modulation of aptamer–ligand-binding by complementary oligonucleotides: A G-quadruplex anti-ochratoxin A aptamer case study. International Journal of Molecular Sciences. 2022, v. 23, # 9, pp. 48761-20, doi:10.3390/ijms23094876.
- Subach O.M., Tashkeev A., Vlaskina A.V., Petrenko D.E., Gaivoronskii F.A., Nikolaeva A.Y., Ivashkina O.I., Anokhin K.V., Popov V.O., Boyko K.M., Subach F.V. The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer. International Journal of Molecular Sciences. 2022, v. 23, # 6, pp. 32081-22, doi:10.3390/ijms23063208.
- Subach O.M., Vlaskina A.V., Agapova Y.K., Korzhenevskiy D.A., Nikolaeva A.Y., Varizhuk A.M., Subach M.F., Patrushev M.V., Piatkevich K.D., Boyko K.M., Subach F.V. cNTnC and fYTnC2, Genetically Encoded Green Calcium Indicators based on Troponin C from Fast Animals. International Journal of Molecular Sciences. 2022, v. 23, # 23, pp. 146141-21, doi:10.3390/ijms232314614.
- Vadim Ershov, Natalia Tarasova, Evgeny Abkhalimov, Alexey Safonov, Vladimir Sorokin, Boris Ershov. Photochemical Synthesis of Silver Hydrosol Stabilized by Carbonate Ions and Study of Its Bactericidal Impact on Escherichia coli: Direct and Indirect Effects. International Journal of Molecular Sciences. 2022, v. 23, # 2, pp. 9491-20, doi:10.3390/ijms23020949.
- Vasileva I., Morozova O., Shumakovich G., Yaropolov A. Betaine-Based Deep Eutectic Solvent as a New Media for Laccase-Catalyzed Template-Guided Polymerization/Copolymerization of Aniline and 3-Aminobenzoic Acid. International Journal of Molecular Sciences. 2022, v. 23, # 19, pp. 114091-11, doi:10.3390/ijms231911409.
- Костенко Д. О., Коротков ЕВ. Application of the MAHDS Method for Multiple Alignment of Highly Diverged Amino Acid Sequences. International Journal of Molecular Sciences. 2022, v. 23, # 7, pp. 37643764-3778, doi:10.3390/ijms23073764.
- Шабаев А. В., Моисеенко К. В., Глазунова О. А., Савинова О. С., Федорова Т. В. Comparative Analysis of Peniophora lycii and Trametes hirsuta Exoproteomes Demonstrates “Shades of Gray” in the Concept of White-Rotting Fungi. International Journal of Molecular Sciences. 2022, v. 23, pp. 103221-17, doi:10.3390/ijms231810322.
- Krivitskaya A.V., Khrenova M.G. Interplay between the Enamine and Imine Forms of the Hydrolyzed Imipenem in the Active Sites of Metallo-beta-lactamases and in Water Solution. Journal of Chemical Information and Modeling. 2022, v. 62, # 24, pp. 6519-6529, doi:10.1021/acs.jcim.2c00539.
- Natalia N. Drozd, Alexey P. Lunkov, Balzhima Ts. Shagdarova, Yulia V. Zhuikova, Alla V. Il’ina, Valery P. Varlamov. Chitosan/heparin layer-by-layer coatings for improving thromboresistance of polyurethane. Surfaces and Interfaces. 2022, v. 28, pp. 1016741-12, doi:10.1016/j.surfin.2021.101674.
- Olesya I. Volokh, Anastasia L. Sivkina, Andrey V. Moiseenko, Anna V. Popinako, Maria G. Karlova, Maria E. Valieva, Elena Y. Kotova, Mikhail P. Kirpichnikov, Timothy Formosa, Vasily M. Studitsky, Olga S. Sokolova. Mechanism of curaxin-dependent nucleosome unfolding by FACT. Frontiers in Molecular Biosciences. 2022, pp. 10481171-13, doi:10.3389/fmolb.2022.1048117.
- Zykova AA, Blokhina EA, Stepanova LA, Shuklina MA, Tsybalova LM, Kuprianov VV, Ravin NV. Nanoparticles based on artificial self-assembling peptide and displaying M2e peptide and stalk HA epitopes of influenza A virus induce potent humoral and T-cell responses and protect against the viral infection. Nanomedicine. 2022, v. 39, pp. 1024631-11, doi:10.1016/j.nano.2021.102463.
- Glenn S.M., Turapov O., Makarov V., Kell D.B., Mukamolova G. Dimethyl fumarate eliminates differentially culturable Mycobacterium tuberculosis in an intranasal murine model of tuberculosis. Frontiers in cellular and infection microbiology. 2022, v. 12, pp. 9572871-7, doi:10.3389/fcimb.2022.957287.
- Yurkova M.S., Fedorov A.N. GroEL—A Versatile Chaperone for Engineering and a Plethora of Applications. Biomolecules. 2022, v. 12, # 5, pp. 6071-12, doi:10.3390/biom12050607.
- Andrei V. Gannesen, Rustam H. Ziganshin, Evelina L. Zdorovenko, Alena I. Klimko, Elena A. Ianutsevich, Olga A. Danilova, Vera M. Tereshina, Maxim V. Gorbachevskii, Maria A. Ovcharova, Ekaterina D. Nevolina, Sergey V. Martyanov, Alexander S. Shashkov, Andrey S. Dmitrenok, Andrei A. Novikov, Marina V. Zhurina, Ekaterina A. Botchkova, Philipp V. Toukach, Vladimir K. Plakunov. Epinephrine extensively changes the biofilm matrix composition in Micrococcus luteus C01 isolated from human skin. Frontiers in Microbiology. 2022, v. 13, pp. 10039421-20, doi:10.3389/fmicb.2022.1003942.
- M. Uzun, V. Koziaeva, M. Dziuba, P. Leão, M. Krutkina, D. Grouzdev. Detection of interphylum transfers of the magnetosome gene cluster in magnetotactic bacteria. Frontiers in Microbiology. 2022, v. 13, pp. 9457341-15, doi:10.3389/fmicb.2022.945734.
- Thomas Klaus, Sabrina Ninck, Andreas Albersmeier, Tobias Busche, Daniel Wibberg, Jianbing Jiang, Alexander Elcheninov, Kseniya Zayulina, Farnusch Kaschani, Christopher Bräsen, Herman S. Overkleeft, Jörn Kalinowski, Ilya Kublanov, Markus Kaiser, Bettina Siebers. Activity-Based Protein Profiling for the Identification of Novel Carbohydrate-Active Enzyme Involved in Xylan Degradation in the Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1E. Frontiers in Microbiology. 2022, v. 12, pp. 7340391-22, doi:10.3389/fmicb.2021.734039.
- Begmatov Shahjahon, Beletsky Alexey V, Dedysh Svetlana N, Mardanov Andrey V, Ravin Nikolai V. Genome analysis of the candidate phylum MBNT15 bacterium from a boreal peatland predicted its respiratory versatility and dissimilatory iron metabolism. Frontiers in Microbiology. 2022, v. 13, pp. 9517611-14, doi:10.3389/fmicb.2022.951761.
- Kallistova A., Nikolaev Y., Grachev V., Beletsky A., Gruzdev E., Kadnikov V., Dorofeev A., Berestovskaya J., Pelevina A., Zekker I., Ravin N., Pimenov N., Mardanov A. New insight into the interspecies shift of anammox bacteria Ca. “Brocadia” and Ca. “Jettenia” in reactors fed with formate and folate. Frontiers in Microbiology. 2022, v. 12, pp. 8022011-19, doi:10.3389/fmicb.2021.802201.
- Khomyakova M.A., Zavarzina D.G., Merkel A.Y., Klyukina A.A., Pikhtereva V.A., Gavrilov S.N., Slobodkin A.I. The first cultivated representatives of the actinobacterial lineage OPB41 isolated from subsurface environments constitute a novel order Anaerosomatales. Frontiers in Microbiology. 2022, v. 13, pp. 10475801-16, doi:10.3389/fmicb.2022.1047580.
- Sorokin D.Y., Elcheninov A.G., Khijniak T.V., Kolganova T.V., Kublanov I.V. Selective enrichment on a wide polysaccharide spectrum allowed isolation of novel metabolic and taxonomic groups of haloarchaea from hypersaline lakes. Frontiers in Microbiology. 2022, v. 13, pp. 10593471-14, doi:10.3389/fmicb.2022.1059347.
- Stephen Nayfach, Simon Roux, Rekha Seshadri, …, Vitaly V. Kadnikov, …, Nikolai Ravin, …, Emiley A. Eloe-Fadrosh. A genomic catalog of Earth’s microbiomes. // Nature Biotechnology. 2021, v. 39, # 1, p. 499-511, doi: 10.1038/s41587-020-0718-6
- Artem Grebenko, Anton Bubis, Konstantin Motovilov, Viacheslav Dremov, Evgeny Korostylev, Ivan Kindiak, Fedor S. Fedorov, Sergey Luchkin, Yuliya Zhuikova, Aleksandr Trofimenko, Gleb Filkov, Georgiy Sviridov, Andrey Ivanov, Jordan T. Dull, Rais Mozhchil, Andrey Ionov, Valery Varlamov, Barry P. Rand, Vitaly Podzorov, Albert G. Nasibulin. Green Lithography for Delicate Materials. // Advanced Functional Materials. 2021, v. 31, # 27, p. 1-10, Article Number: 2101533, doi: 10.1002/adfm.202101533
- Bonchuk A., Boyko K., Fedotova A., Nikolaeva A., Lushchekina S., Khrustaleva A., Popov V., Georgiev P. Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila. // Nucleic Acids Research. 2021, v. 49, # 4, p. 2 375-2 389, doi: 10.1093/nar/gkab061
- Egorov A.A., Alexandrov A.I., Urakov V.N., Makeeva D.S., Edakin R.O., Kushchenko A.S., Gladyshev V.N., Kulakovskiy I.V., Dmitriev S.E. A standard knockout procedure alters expression of adjacent loci at the translational level. // Nucleic Acids Research. 2021, v. 49, # 19, p. 11 134-11 144, doi: 10.1093/nar/gkab872
- Miga K.H., Alexandrov I.A. Variation and Evolution of Human Centromeres: A Field Guide and Perspective. // Annual Review of Genetics. 2021, v. 55, p. 583-602, doi: 10.1146/annurev-genet-071719-020519
- Gergo Gogl, Kristina V Tugaeva, Pascal Eberling, Camille Kostmann, Gilles Trave, Nikolai N Sluchanko. Hierarchized phosphotarget binding by the seven human 14-3-3 isoforms. // Nature Communications. 2021, v. 12, # 1, p. 1-12, Article Number: 1677, doi: 10.1038/s41467-021-21908-8
- Fedor S Sharko, Eugenia S Boulygina, Svetlana V Tsygankova, Natalia V Slobodova, Dmitry A Alekseev, Anna A Krasivskaya, Sergey M Rastorguev, Alexei N Tikhonov, Artem V Nedoluzhko. Steller’s sea cow genome suggests this species began going extinct before the arrival of Paleolithic humans. // Nature Communications. 2021, v. 12, # 1, p. 1-8, Article Number: 2215, doi: 10.1038/s41467-021-22567-5
- Tyurin A, Alferova V, Paramonov A, Shuvalov M, Kudryakova G, Rogozhin E, Zherebker A, Brylev V, Chistov A, Baranova A, Birykov M, Ivanov I, Prokhorenko I, Grammatikova N, Kravchenko T, Isakova E, Mirchink E, Gladkikh E, Svirshchevskaya E, Mardanov A, Beletsky A, Kocharovskaya M, Kulyaeva V, Shashkov A, Tsvetkov D, Nifantiev N, Apt A, Majorov K, Efimova S, Ravin N, Nikolaev E, Ostroumova O, Katrukha G, Lapchinskaya O, Dontsova O, Terekhov S, Osterman I, Shenkarev Z, Korshun VA. Gausemycins A,B — cyclic lipoglycopeptides from Streptomyces sp. // Angewandte Chemie — International Edition. 2021, v. 60, # 34, p. 18 694-18 703, doi: 10.1002/anie.202104528
- Khrenova M. G., Grigorenko B. L., Nemukhin A. V. Molecular modeling reveals the mechanism of ran-ranGAP-catalyzed guanosine triphosphate hydrolysis without an arginine finger. // ACS Catalysis. 2021, v. 11, # 15, p. 8 985-8 998, doi: 10.1021/acscatal.1c00582
- Egorova A., Jackson M., Gavrilyuk V., Makarov V. Pipeline of anti‐Mycobacterium abscessus small molecules: Repurposable drugs and promising novel chemical entities. // Medicinal Research Reviews. 2021, v. 41, # 4, p. 2 350-2 387, doi: 10.1002/med.21798
- Eric D. Becraft, Maggie C. Y. Lau Vetter, Oliver K. I. Bezuidt, Julia M. Brown, Jessica M. Labonté, Kotryna Kauneckaite-Griguole, Ruta Salkauskaite, Gediminas Alzbutas, Joshua D. Sackett, Brittany R. Kruger, Vitaly Kadnikov, Esta van Heerden, Duane Moser, Nikolai Ravin, Tullis Onstott, Ramunas Stepanauskas. Evolutionary stasis of a deep subsurface microbial lineage. // ISME Journal. 2021, v. 15, p. 2 830-2 842, doi: 10.1038/s41396-021-00965-3
- Kachalkin A.V., Tomashevskaya M.A., Pankratov T.A. Teunia lichenophila, sp. nov. // Persoonia. 2021, v. 46, p. 512-513, doi: 10.3767/persoonia.2021.46.11
- Hui Li, Shan Yang, Mikhail V. Semenov, Fei Yao, Ji Ye, Rencang Bu, Ruiao Ma, Junjie Lin, Irina Kurganova, Xugao Wang, Ye Deng, Irina Kravchenko, Yong Jiang, Yakov Kuzyakov. Temperature sensitivity of SOM decomposition is linked with a K-s elected microbial community. // Global Change Biology. 2021, v. 27, # 12, p. 2 763-2 779, doi: 10.1111/gcb.15593
- Susan G. Karp, Alexandra M. Rozhkova, Margarita V. Semenova, Dmitrii O. Osipov, Suellen T.Z. de Pauli, Olga A. Sinitsyna, Ivan N. Zorov, Luciana Porto de Souza Vandenberghe, Carlos R. Soccol, Arkady P. Sinitsyn. Designing enzyme cocktails from Penicillium and Aspergillus species for the enhanced saccharification of agro-industrial wastes. // Bioresource Technology. 2021, v. 330, p. 1-12, Article Number: 124888, doi: 10.1016/j.biortech.2021.124888
- Konstantin V. Moiseenko, Olga A. Glazunova, Olga S. Savinova, Daria V. Vasina, Alexander Ya. Zherebker, Natalia A. Kulikova, Evgeny N. Nikolaev, Tatiana V. Fedorova. Relation between lignin molecular profile and fungal exo-proteome during kraft lignin modification by Trametes hirsuta LE-BIN 072. // Bioresource Technology. 2021, v. 335, p. 1-10, Article Number: 125229, doi: 10.1016/j.biortech.2021.125229
- Céline Barlier, Diego Barriales, Alexey Samosyuk, Sascha Jung, Srikanth Ravichandran, Yulia A. Medvedeva, Juan Anguita, Antonio del So. A Catalogus Immune Muris of the mouse immune responses to diverse pathogens. // CELL DEATH & DISEASE. 2021, v. 12, p. 1-9, Article Number: 798, doi: 10.1038/s41419-021-04075-y
- Chiarelli L.R., Degiacomi G., Egorova A., Makarov V., Pasca M.R. Nitric oxide-releasing compounds for lung infections treatment. // Drug Discovery Today. 2021, v. 26, # 2, p. 542-550, doi: 10.1016/j.drudis.2020.10.027
- Sajwan R.K., Pandey S., Kumar R., Dhiman T.K., Eremin S.A., Solanki P.R. Enhanced fluorescence of mercaptopropionic acid-capped zinc sulfide quantum dots with moxifloxacin in food and water samples via reductive photoinduced electron transfer. // Environmental Science-Nano. 2021, v. 8, # 9, p. 2 693-2 705, doi: 10.1039/d1en00483b
- Hendrickson O.D., Zvereva E.A., Vostrikova N.L., Chernukha I.M., Dzantiev B.B., Zherdev A.V. Lateral flow immunoassay for sensitive detection of undeclared chicken meat in meat products. // Food Chemistry. 2021, v. 344, p. 1-8, Article Number: 128598, doi: 10.1016/j.foodchem.2020.128598
- Hendrickson O.D., Zvereva E.A., Dzantiev B.B., Zherdev A.V. Sensitive lateral flow immunoassay for the detection of pork additives in raw and cooked meat products. // Food Chemistry. 2021, v. 359, p. 1-9, Article Number: 129927, doi: 10.1016/j.foodchem.2021.129927
- Yadav A.K., Verma D., Lakshmi G.B.V.S., Eremin S., Solanki P.R. Fabrication of label-free and ultrasensitive electrochemical immunosensor based on molybdenum disulfide nanoparticles modified disposable ITO: An analytical platform for antibiotic detection in food samples. // Food Chemistry. 2021, v. 363, p. 1-13, Article Number: 130245, doi: 10.1016/j.foodchem.2021.130245
- Ivanov A.V., Safenkova I.V., Zherdev A.V., Dzantiev B.B. Multiplex assay of viruses integrating recombinase polymerase amplification, barcode — anti-barcode pairs, blocking anti-primers, and lateral flow assay. // Analytical Chemistry. 2021, v. 93, # 40, p. 13 641-13 650, doi: 10.1021/acs.analchem.1c03030
- Nefedova VV, Koubassova NA, Borzova VA, Kleymenov SY, Tsaturyan AK, Matyushenko AM, Levitsky DI. Tropomyosin pseudo-phosphorylation can rescue the effects of cardiomyopathy-associated mutations. // International Journal of Biological Macromolecules. 2021, v. 166, p. 424-434, doi: 10.1016/j.ijbiomac.2020.10.201
- Adelya Khayrova, Sergey Lopatin, Valery Varlamov. Obtaining chitin, chitosan and their melanin complexes from insects. // International Journal of Biological Macromolecules. 2021, v. 167, p. 1 319-1 328, doi: 10.1016/j.ijbiomac.2020.11.086
- Pavel D. Parshin, Ustina A. Martysuk, Anna V. Popinako, Svyatoslav S. Savin, Vladimir I. Tishkov, Anastasia A. Pometun. Phenylacetone monooxygenase: Coenzyme specificity. // Protein Science. 2021, v. 30, # S1, p. 161-162, Article Number: ABS 435, doi: 10.1002/pro.4191
- Rogov A.G., Goleva T.N., Epremyan K.K., Kireev I.I., Zvyagilskaya R.A. Propagation of Mitochondria-Derived Reactive Oxygen Species within the Dipodascus magnusii Cells. // Antioxidants. 2021, v. 10, # 1, p. 1-17, Article Number: 120, doi: 10.3390/antiox10010120
- Kosmachevskaya O.V., Novikova N.N., Topunov A.F. Carbonyl stress in red blood cells and hemoglobin. // Antioxidants. 2021, v. 10, # 2, Article Number: 253, doi: 10.3390/antiox10020253
- Maria A. Slugina, Gleb I. Efremov, Anna V. Shchennikova, Elena Z. Kochieva. Characterization of RIN Isoforms and Their Expression in Tomato Fruit Ripening. // Cells. 2021, v. 10, # 7, p. 1-18, Article Number: 1739, doi: 10.3390/cells10071739
- Berlina A.N., Komova N.S., Zherdev A.V., Dzantiev B.B. Combination of phenylboronic acid and oligocytosine for selective and specific detection of lead(ii) by lateral flow test strip. // Analytica Chimica Acta. 2021, v. 1155, p. 1-12, Article Number: 338318, doi: 10.1016/j.aca.2021.338318
- Egorova A., Bogner E., Novoselova E., Zorn K. M., Ekins S., Makarov V. Dispirotripiperazine-core compounds, their biological activity with a focus on broad antiviral property, and perspectives in drug design (mini-review). // European Journal of Medicinal Chemistry. 2021, v. 211, Article Number: 113014, doi: 10.1016/j.ejmech.2020.113014
- Liudmila A. Alexandrova, Maxim V. Jasko, Sergey D. Negrya, Pavel N. Solyev, Oleg V. Shevchenko, Andrei P. Solodinin, Daria P. Kolonitskaya, Inna L. Karpenko, Olga V. Efremenkova, Alla A. Glukhova, Yuliya V. Boykova, Tatiana A. Efimenko, Natalya V. Kost, Darya A. Avdanina, Gulgina K. Nuraeva, Ivan A. Volkov, Sergey N. Kochetkov, Alexander A. Zhgun. Discovery of novel N4-alkylcytidines as promising antimicrobial agents. // European Journal of Medicinal Chemistry. 2021, v. 215, p. 1-13, Article Number: 13212, doi: 10.1016/j.ejmech.2021.113212
- Karginov A.V., Alexandrov A.I., Kushnirov V.V., Agaphonov M.O. Perturbations in the Heme and Siroheme Biosynthesis Pathways Causing Accumulation of Fluorescent Free Base Porphyrins and Auxotrophy in Ogataea. // Journal of Fungi. 2021, v. 7, # 10, p. 1-10, Article Number: 884, doi: 10.3390/jof7100884
- Grosfeld E.V., Бидюк В., Mitkevich O.V., Ghazy Eslam, Kushnirov V.V., Alexandrov A.I. A Systematic Survey of Characteristic Features of Yeast Cell Death Triggered by External Factors. // Journal of Fungi. 2021, v. 7, # 11, p. 1-27, Article Number: 886, doi: 10.3390/jof7110886
- Martina Loi, Olga Glazunova, Tatyana Fedorova, Antonio F. Logrieco, Giuseppina Mulè. Fungal Laccases: The Forefront of Enzymes for Sustainability. // Journal of Fungi. 2021, v. 7, # 12, p. 1-26, Article Number: 1048, doi: 10.3390/jof7121048
- Федосеева Е.В., Терешина В.М., Данилова О.А., Януцевич Е.А., Якименко О.С., Терехова В.А. Effect of humic acid on the composition of carbohydrates and lipids in a melanin-containing phytopatogenic fungus Alternaria alternata. // Environmental Research. 2021, v. 193, p. 1-8, Article Number: 110395, doi: 10.1016/j.envres.2020.110395
- Dziuba M., Riese C.N., Borgert L., Wittchen M., Busche T., Kalinowski J., Uebe R., Schüler D. The Complex Transcriptional Landscape of Magnetosome Gene Clusters in Magnetospirillum gryphiswaldense. // mSystems. 2021, v. 6, # 5, p. 1-17, Article Number: e00893-21, doi: 10.1128/mSystems.00893-21
- Ahn A-C., Jongepier E., Schuurmans J.M., Rijpstra W.I.C., Sinninghe Damsté J.S., Galinski E.A., Roman P., Sorokin D., Muyzer G. Molecular and physiological adaptations to low temperature in Thioalkalivibrio strains isolated from soda lakes with different temperature regimes. // mSystems. 2021, v. 6, # 2, p. 1-15, Article Number: e01202-20, doi: 10.1128/mSystems.01202-20
- Karnachuk O.V, Lukina A.P, Kadnikov V.V, Sherbakova V.A, Beletsky A.V, Mardanov A.V, Ravin N.V. Targeted isolation based on metagenome-assembled genomes reveals a phylogenetically distinct group of thermophilic spirochetes from deep biosphere. // Environmental Microbiology. 2021, v. 23, # 7, p. 3 585-3 598, doi: 10.1111/1462-2920.15218
- Sorokin D.Y., Diender M., Merkel A.Y., Koenen M., Bale N.J., Pabst M., Sinninghe Damsté J.S., Sousa D.Z. Natranaerofaba carboxydovora gen. nov., sp. nov., an extremely haloalkaliphilic CO-utilizing acetogen from a hypersaline soda lake representing a novel deep phylogenetic lineage in the class ‘Natranaerobiia’. // Environmental Microbiology. 2021, v. 23, # 7, p. 3 460-3 476, doi: 10.1111/1462-2920.15241
- Dedysh S. N., Beletskiy Aleksey V., Ivanova Anastasiya A., Kulichevskaya Irina S., Suzina Natalya E., Philippov DA, Rakitin A. L., Mardanov A. V., Ravin N. V. Wide distribution of Phycisphaera-like planctomycetes from WD2101 soil group in peatlands and genome analysis of the first cultivated representative. // Environmental Microbiology. 2021, v. 23, # 3, p. 1 510-1 526, doi: 10.1111/1462-2920.15360
- Sorokin D.Y., Messina E., Smedile F., La Cono V., Hallsworth J.E., Yakimov M.M. Carbohydrate-dependent sulfur respiration in halo(alkali)philic archaea. // Environmental Microbiology. 2021, v. 23, # 7, p. 3 789-3 808, doi: 10.1111/1462-2920.15421
- Alexandr G. Kruchinin, Olga S. Savinova, Olga A. Glazunova, Konstantin V. Moiseenko, Evgeniya Yu. Agarkova, Tatyana V. Fedorova. Hypotensive and Hepatoprotective Properties of the Polysaccharide-Stabilized Foaming Composition Containing Hydrolysate of Whey Proteins. // Nutrients. 2021, v. 13, # 3, p. 1-14, Article Number: 1031, doi: 10.3390/nu13031031
- Gavrilov S.N., Zavarzina D.G., Elizarov I.M., Tikhonova T.V., Dergousova N.I., Popov V.O., Lloyd J.R., Knight D., EL-Naggar M.Y., Pirbadian S., Leung K.M., Robb F.T., Zakhartsev M.V., Bretschger O., Bonch-Osmolovskaya E.A. Novel extracellular election transfer channels in a gram-positive thermophilic bacterium. // Frontiers in Microbiology. 2021, v. 11, p. 1-21, Article Number: 597818, doi: 10.3389/fmicb.2020.597818
- Slobodkina G., Allioux M., Merkel A., Cambon-Bonavita M.-A., Alain K., Jebbar M., Slobodkin A. Physiological and genomic characterization of a hyperthermophilic archaeon Archaeoglobus neptunius sp. nov. isolated from a deep-sea hydrothermal vent warrants the reclassification of the genus Archaeoglobus. // Frontiers in Microbiology. 2021, v. 12, p. 1-15, Article Number: 679245, doi: 10.3389/fmicb.2021.679245
- Mindlin Sofia, Olga Maslova, Alexey Beletsky, Varvara Nurmukanova, Zhiyong Zong, Andrey Mardanov, Mayya Petrova. UBIQUITOUS CONJUGATIVE MEGA-PLASMIDS OF ACINETOBACTER SPECIES AND THEIR ROLE IN HORIZONTAL TRANSFER OF MULTI-DRUG RESISTANCE. // Frontiers in Microbiology. 2021, v. 12, p. 1-13, Article Number: 728644, doi: 10.3389/fmicb.2021.728644
- Igor Y. Oshkin, Olga V. Danilova, Sergey Y. But, Kirill K. Miroshnikov, Ruslan Z. Suleimanov, Svetlana E. Belova, Ekaterina N. Tikhonova, Nikolai N. Kuznetsov, Valentina N. Khmelenina, Nikolai V. Pimenov, Svetlana N. Dedysh. Expanding Characterized Diversity and the Pool of Complete Genome Sequences of Methylococcus Species, the Bacteria of High Environmental and Biotechnological Relevance. // Frontiers in Microbiology. 2021, v. 12, p. 1-18, Article Number: 756830, doi: 10.3389/fmicb.2021.756830
- Ravin NV, Rudenko TS, Smolyakov DD, Beletsky AV, Rakitin AL, Markov ND, Fomenkov A, Sun L, Roberts RJ, Novikov AA, Karnachuk OV, Grabovich MY. Comparative genome analysis of the genus Thiothrix involving three novel species, Thiothrix subterranea sp. nov. Ku-5, Thiothrix litoralis sp. nov. AS and ‘Candidatus Thiothrix anitrata’ sp. nov. A52, revealed the conservation of the pathways of dissimilatory sulfur metabolism and variations in the genetic inventory for nitrogen metabolism and autotrophic carbon fixation. // Frontiers in Microbiology. 2021, v. 12, p. 1-12, Article Number: 760289, doi: 10.3389/fmicb.2021.760289
- Igor A. Yaroshevich, Eugene G. Maksimov, Nikolai N. Sluchanko, Dmitry V. Zlenko, Alexey V. Stepanov, Ekaterina A. Slutskaya, Yury B. Slonimskiy, Viacheslav S. Botnarevskii, Alina Remeeva, Ivan Gushchin, Kirill Kovalev, Valentin I. Gordeliy, Ivan V. Shelaev, Fedor E. Gostev, Dmitry Khakhulin, Vladimir V. Poddubnyy, Timofey S. Gostev, Dmitry A. Cherepanov, Tomáš Polívka, Miroslav Kloz, Thomas Friedrich, Vladimir Z. Paschenko, Victor A. Nadtochenko, Andrew B. Rubin, Mikhail P. Kirpichnikov. Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein. // Communications Biology. 2021, v. 4, p. 1-13, Article Number: 539, doi: 10.1038/s42003-021-02022-3
- Dergalev A. A., Urakov V. N., Agaphonov M. O., Alexandrov A. I., Kushnirov V.V. Dangerous Stops: Nonsense Mutations Can Dramatically Increase Frequency of Prion Conversion. // International Journal of Molecular Sciences. 2021, v. 22, # 4, p. 1-12, Article Number: 1542, doi: 10.3390/ijms22041542
- Marchenko M, Nefedova V, Artemova N, Kleymenov S, Levitsky D, Matyushenko A. Structural and Functional Peculiarities of Cytoplasmic Tropomyosin Isoforms, the Products of TPM1 and TPM4 Genes. // International Journal of Molecular Sciences. 2021, v. 22, # 10, p. 1-15, Article Number: 5141, doi: 10.3390/ijms22105141
- Olga K. Anisimova, Anna V. Shchennikova, Elena Z. Kochieva, Mikhail A. Filyushin. Pathogenesis‐Related Genes of PR1, PR2, PR4 and PR5 Families Are Involved in the Response to Fusarium Infection in Garlic (Allium sativum L.). // International Journal of Molecular Sciences. 2021, v. 22, # 13, p. 1-22, Article Number: 6688, doi: 10.3390/ijms22136688
- Руденко В. М., Коротков Евгений В. Search for Highly Divergent Tandem Repeats in Amino Acid Sequences. // International Journal of Molecular Sciences. 2021, v. 22, # 13, p. 2-17, Article Number: 7096, doi: 10.3390/ijms22137096
- Kaplun D., Starshin A., Sharko F., Gainova K., Filonova G., Zhigalova N., Mazur A., Prokhortchouk E., Zhenilo S. Kaiso Regulates DNA Methylation Homeostasis. // International Journal of Molecular Sciences. 2021, v. 22, # 14, p. 1-15, Article Number: 7587, doi: 10.3390/ijms22147587
- Maria Dumina, Alexander Zhgun, Marina Pokrovskaya, Svetlana Aleksandrova, Dmitry Zhdanov, Nikolay Sokolov, Michael El’darov. A Novel L-Asparaginase from Hyperthermophilic Archaeon Thermococcus sibiricus: Heterologous Expression and Characterization for Biotechnology Application. // International Journal of Molecular Sciences. 2021, v. 22, # 18, p. 1-17, Article Number: 9894, doi: 10.3390/ijms22189894
- Averina OA, Permyakov OA, Grigorieva OO, Starshin AS, Mazur AM, Prokhortchouk EB, Dontsova OA, Sergiev PV. Comparative Analysis of Genome Editors Efficiency on a Model of Mice Zygotes Microinjection. // International Journal of Molecular Sciences. 2021, v. 22, # 19, p. 1-10, Article Number: 10221, doi: 10.3390/ijms221910221
- Savinova O.S., Glazunova O.A., Moiseenko K.V., Begunova A.V., Rozhkova I.V, Fedorova T.V. Exoproteome Analysis of Antagonistic Interactions between the Probiotic Bacteria Limosilactobacillus reuteri LR1 and Lacticaseibacillus rhamnosus F and Multidrug Resistant Strain of Klebsiella pneumonia. // International Journal of Molecular Sciences. 2021, v. 22, # 20, p. 1-18, Article Number: 10999, doi: 10.3390/ijms222010999
- Grigorov A, Bychenko O, Salina EG, Skvortsova Y, Mazurova A, Skvortsov T, Kaprelyants A, Azhikina T. Small RNA F6 Provides Mycobacterium smegmatis Entry into Dormancy. // International Journal of Molecular Sciences. 2021, v. 22, # 21, Article Number: 11536, doi: 10.3390/ijms222111536
- Karpov D.S., Goncharenko A.V., Usachev E.V., Vasina D.V., Divisenko E.V., Chalenko Y.M., Pochtovyi A.A., Ovchinnikov R.S., Makarov V.V., Yudin S.M., Tkachuk A.P., Gushchin V.A. A Strategy for the Rapid Development of a Safe Vibrio cholerae Candidate Vaccine Strain. // International Journal of Molecular Sciences. 2021, v. 22, # 21, Article Number: 11657, doi: 10.3390/ijms222111657
- Ivanov A.V, Safenkova I.V, Zherdev A.V, Dzantiev B.B. Recombinase polymerase amplification assay with and without nuclease-dependent-labeled oligonucleotide probe. // International Journal of Molecular Sciences. 2021, v. 22, # 21, p. 1-12, Article Number: 11885, doi: 10.3390/ijms222111885
- Subach O.M., Vlaskina A.V., Agapova Y.K., Dorovatovskii P.V., Nikolaeva A.Y., Ivashkina O.I., Popov V.O., Piatkevich K.D., Khrenova M.G., Smirnova T.A., Boyko K.M., Subach F.V. LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift. // International Journal of Molecular Sciences. 2021, v. 22, # 23, Article Number: 12887, doi: 10.3390/ijms222312887
- Anna Egorova, Elena G. Salina, Vadim Makarov. Targeting Non-Replicating Mycobacterium tuberculosis and Latent Infection: Alternatives and Perspectives. // International Journal of Molecular Sciences. 2021, v. 22, # 24, Article Number: 13317, doi: 10.3390/ijms222413317
- Maria Dumina, Alexander Zhgun, Marina Pokrovskaya, Svetlana Aleksandrova, Dmitry Zhdanov, Nikolay Sokolov, Michael El’darov. Highly Active Thermophilic L-Asparaginase from Melioribacter roseus Represents a Novel Large Group of Type II Bacterial L-Asparaginases from Chlorobi-Ignavibacteriae-Bacteroidetes Clade. // International Journal of Molecular Sciences. 2021, v. 22, # 24, p. 1-17, Article Number: 13632, doi: 10.3390/ijms222413632
- Vechtomova YL, Telegina TA, Buglak AA, Kritsky MS. UV Radiation in DNA Damage and Repair Involving DNA-Photolyases and Cryptochromes. // Biomedicines. 2021, v. 9, # 11, p. 1-13, Article Number: 1564, doi: 10.3390/biomedicines9111564
- Nechaeva N.L., Sorokina O.N., Konstantinova T.S., Vasilyeva A.D., Yurina L.V., Byzova N.A., Bugrova A.E., Yanovich S.V., Eremenko A.V., Kurochkin I.N. Simultaneous express immunoassay of multiple cardiac biomarkers with an automatic platform in human plasma. // Talanta. 2021, v. 224, p. 1-7, Article Number: 121860, doi: 10.1016/j.talanta.2020.121860
- Panferov V.G., Safenkova I.V., Zherdev A.V., Dzantiev B.B. The steadfast Au@Pt soldier: Peroxide-tolerant nanozyme for signal enhancement in lateral flow immunoassay of peroxidase-containing samples. // Talanta. 2021, v. 225, p. 1-8, Article Number: 121961, doi: 10.1016/j.talanta.2020.121961
- Nikolay A. Chernyh, Sinje Neukirchen, Evgenii N. Frolov, Filipa L. Sousa, Margarita L. Miroshnichenko, Alexander Y. Merkel, Nikolay V. Pimenov, Dimitry Y. Sorokin, Sergio Ciordia, María Carmen Mena, Manuel Ferrer, Peter N. Golyshin, Alexander V. Lebedinsky, Inês A. Cardoso Pereira, Elizaveta A. Bonch-Osmolovskaya. Dissimilatory sulfate reduction in the archaeon ‘Candidatus Vulcanisaeta moutnovskia’ sheds light on the evolution of sulfur metabolism // Nature Microbiology. 2020, v. 5, p. 1428-1438. doi: 10.1038/s41564-020-0776-z
- Bonetti A, Agostini F, Suzuki AM, Hashimoto K, Pascarella G, Gimenez J, Roos L, Nash AJ, Ghilotti M, Cameron CJF, Valentine M, Medvedeva YA, Noguchi S, Agirre E, Kashi K, Samudyata, Luginbühl J, Cazzoli R, Agrawal S, Luscombe NM, Blanchette M, Kasukawa T, Hoon M, Arner E, Lenhard B, Plessy C, Castelo-Branco G, Orlando V, Carninci P. RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions // Nature Communications. 2020, v. 11, 1, # 1018, doi: 10.1038/s41467-020-14337-6
- Pletnev P, Pupov D, Pshanichnaya L, Esyunina D, Petushkov I, Nesterchuk M, Osterman I, Rubtsova M, Mardanov A, Ravin N, Sergiev P, Kulbachinskiy A, Dontsova O. Rewiring of growth-dependent transcription regulation by a point mutation in region 1.1 of the housekeeping σ factor // Nucleic Acids Research. 2020, v. 48, 19, p. 10802-10819. doi: 10.1093/nar/gkaa798
- Ramilowski JA, Yip CW, Agrawal S, Chang JC, Ciani Y, Kulakovskiy IV, Mendez M, Ooi JLC, Ouyang JF, Parkinson N, Petri A, Roos L, Severin J, Yasuzawa K, Abugessaisa I, Akalin A, Antonov IV, Arner E, Bonetti A, Bono H, Borsari B, Brombacher F, Cameron CJ, Cannistraci CV, Cardenas R, Cardon M, Chang H, Dostie J, Ducoli L, Favorov A, Fort A, Garrido D, Gil N, Gimenez J, Guler R, Handoko L, Harshbarger J, Hasegawa A, Hasegawa Y, Hashimoto K, Hayatsu N, Heutink P, Hirose T, Imada EL, Itoh M, Kaczkowski B, Kanhere A, Kawabata E, Kawaji H, Kawashima T, Kelly ST, Kojima M, Kondo N, Koseki H, Kouno T, Kratz A, Kurowska-Stolarska M, Kwon ATJ, Leek J, Lennartsson A, Lizio M, López-Redondo F, Luginbühl J, Maeda S, Makeev VJ, Marchionni L, Medvedeva YA, Minoda A, Müller F, Muñoz-Aguirre M, Murata M, Nishiyori H, Nitta KR, Noguchi S, Noro Y, Nurtdinov R, Okazaki Y, Orlando V, Paquette D, Parr CJC, Rackham OJL, Rizzu P, Sánchez Martinez DF, Sandelin A, Sanjana P, Semple CAM, Shibayama Y, Sivaraman DM, Suzuki T, Szumowski SC, Tagami M, Taylor MS, Terao C, Thodberg M, Thongjuea S, Tripathi V, Ulitsky I, Verardo R, Vorontsov IE, Yamamoto C, Young RS, Baillie JK, Forrest ARR, Guigó R, Hoffman MM, Hon CC, Kasukawa T, Kauppinen S, Kere J, Lenhard B, Schneider C, Suzuki H, Yagi K, de Hoon MJL, Shin JW, Carninci P. Functional annotation of human long noncoding RNAs via molecular phenotyping // Genome Research. 2020, v. 30, 7, p. 1060-1072. doi: 10.1101/gr.254219.119
- Antonov Ivan V. Two Cobalt Chelatase Subunits Can Be Generated from a Single chlD Gene via Programed Frameshifting // Molecular Biology and Evolution. 2020, v. 37, 8, p. 2268-2278. doi: 10.1093/molbev/msaa081
- La Cono V., Messina E., Rohde M., Arcadi E., Ciordia S., Crisafi F., Denaro R., Ferrer M., Giuliano L., Golyshin P.N., Golyshina O.V., Hallsworth J.E., La Spada G., Mena M.C., Merkel A.Y., Shevchenko M.A., Smedile F., Sorokin D.Y., Toshchakov S.V., Yakimov M.M. Symbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides // Proceedings of the National Academy of Sciences of the United States of America. 2020, v. 117, 33, p. 20223-20234. doi: 10.1073/pnas.2007232117
- Tikhonova T.V., Sorokin D.Y., Hagen W.R., Khrenova M.G., Muyzer G., Rakitina T.V., Shabalin I.G., Trofimov A.A., Tsallagov S.I., Popov V.O. Trinuclear cooper biocatalytic center forms an active site of the thiocyanate dehydrogenase // Proceedings of the National Academy of Sciences of the United States of America. 2020, v. 117, 10, p. 5280-5290. doi: 10.1073/pnas.1922133117
- Kleikamp H.B.C., Lin Y.M., McMillan D.G.G., Geelhoed J.S., Naus-Wiezer S.N.H., Van Baarlen P., Saha C., Louwen R., Sorokin D.Y., Van Loosdrecht M.C.M., Pabst M. Tackling the chemical diversity of microbial nonulosonic acids – a universal large-scale survey approach // Chemical Science. 2020, v. 11, 11, p. 3074-3080. doi: 10.1039/c9sc06406k
- Daria Zavarzina, Sergey Gavrilov, Natalia Chistyakova, Angelina Antonova, Maria Gracheva, Alexander Merkel, Anna Perevalova, Michail Chernov, Tatyana Zhilina, Andrey Bychkov, Elizaveta Bonch-Osmolovskaya. SYNTROPHIC GROWTH OF ALKALIPHILIC ANAEROBES CONTROLLED BY FERRIC AND FERROUS MINERALS TRANSFORMATION COUPLED TO ACETOGENESIS // ISME Journal. 2020, № 14, # s41396-019-0527-4, p. 425-436. doi: 10.1038/s41396-019-0527-4
- Kiragosyan K., Picard M., Sorokin D.Y., Dijkstra J., Klok J.B.M., Roman P., Janssen A.J.H. Effect of dimethyl disulfide on the sulfur formation and microbial community composition during the biological H2S removal from sour gas streams // Journal of Hazardous Materials. 2020, v. 386, # 121916, p. 1-18. doi: 10.1016/j.jhazmat.2019.121916
- Kiragosyan K., Picard M., Timmers P.H.A., Sorokin D.Y., Klok J.B.M., Roman P., Janssen A.J.H. Effect of methanethiol on process performance, selectivity and diversity of sulfur-oxidizing bacteria in a dual bioreactor gas biodesulfurization system // Journal of Hazardous Materials. 2020, № 398, # 123002, p. 1-9. doi: 10.1016/j.jhazmat.2020.123002
- Kristina Gudz, Elizaveta S. Permyakova, Andrei Matveev, Andrey Bondarev, Anton Manakhov, Daria Sidorenko, Svetlana Filippovich, Anatoli Brouchkov, Dmitri Golberg, Sergei G. Ignatov, Dmitry V. Shtansky. Pristine and Antibiotic-Loaded Nanosheets/Nanoneedles-Based Boron Nitride Films as a Promising Platform to Suppress Bacterial and Fungal Infections // ACS Applied Materials & Interfaces. 2020, v. 12, 38, p. 42485-42496. doi: 10.1021/acsami.0c10169
- Valeriy G. Metelev, Alexei A. Bogdanov Jr. Synthesis and applications of theranostic oligonucleotides carrying multiple fluorine atoms // Theranostics. 2020, v. 10, 3, p. 1391-1414. doi: 10.7150/thno.37936
- Kachalkin A.V., Tomashevskaya M.A., Pankratov T.A. Heterocephalacria septentrionalis Kachalkin, M.A. Tomashevskaya & T.A. Pankratov, sp. nov. Fungal Planet description sheet 1084. // Persoonia. 2020, v. 44, p. 301-459. doi: 10.3767/persoonia.2020.44.11
- Parshina E., Eroshkin F., Оrlov E., Gyoeva F., Shokhina A., Staroverov D., Belousov V., Zhigalova N., Prokhortchouk E., Zaraisky A., Martynova N. Cytoskeletal Protein Zyxin Inhibits the Activity of Genes Responsible for Embryonic Stem Cell Status // Cell Reports. 2020, v. 337, # 108396, p. 1-15. doi: 10.1016/j.celrep.2020.108396
- Francisca Contreras, Martin J. Thiele, Subrata Pramanik, Aleksandra M. Rozhkova, Anna S. Dotsenko, Ivan N. Zorov, Arkady P. Sinitsyn, Mehdi D. Davari, Ulrich Schwaneberg. KnowVolution of a GH5 Cellulase from Penicillium verruculosum to Improve Thermal Stability for Biomass Degradation // ACS Sustainable Chemistry & Engineering. 2020, v. 8, p. 12388-12399. doi: 10.1021/acssuschemeng.0c02465
- Dotsenko A.S., Rozhkova A.M., Zorov I.N., Sinitsyn A.P. Protein surface engineering of endoglucanase Penicillium verruculosum for improvement in thermostability and stability in the presence of 1-butyl-3-methylimidazolium chloride ionic liquid // Bioresource Technology. 2020, v. 296, # 122370, p. 1-8. doi: 10.1016/j.biortech.2019.122370
- Alexey Lunkov, Balzhima Shagdarova, Mariya Konovalovа, Yuliya Zhuikova, Natalia Drozd, Alla Il’ina, Valery Varlamov. Synthesis of silver nanoparticles using gallic acid-conjugated chitosan derivatives // Carbohydrate Polymers. 2020, v. 234, # 115916, p. 1-11. doi: 10.1016/j.carbpol.2020.115916
- Sergey M. Abramov, Julian Tejada, Lars Grimm, Franziska Schädler, Aleksandr Bulaev, Elizabeth J. Tomaszewski, James M. Byrne, Daniel Strau, Harald Thorwarth, Ricardo Amils, Sara Kleindienst, Andreas Kappler. Role of biogenic Fe(III) minerals as a sink and carrier of heavy metals in the Rio Tinto, Spain // Science of the Total Environment. 2020, v. 718, # 137294, p. 1-11. doi: 10.1016/j.scitotenv.2020.137294
- Hendrickson O.D., Zvereva E.A., Zherdev A.V., Godjevargova T., Xu C., Dzantiev B.B. Development of the double immunochromatographic test system for simultaneous determination of lincomycin and tylosin antibiotics in foodstuffs // Food Chemistry. 2020, v. 318, # 126510 . doi: 10.1016/j.foodchem.2020.126510
- Panferov V.G., Safenkova I.V., Zherdev A.V., Dzantiev B.B. Urchin peroxidase-mimicking Au@Pt nanoparticles as a label in lateral flow immunoassay: impact of nanoparticle composition on detection limit of Clavibacter michiganensis // Microchimica Acta. 2020, v. 187, # 268 . doi: 10.1007/s00604-020-04253-3
- Lupien A., Shi-Yan Foo C., Savina S., Vocat A., Piton J., Monakhova N., Benjak A., Lamprecht D.A., Steyn A.J.C., Pethe K., Makarov V.A., Cole S.T. New 2-Ethylthio-4-methylaminoquinazoline Derivatives Inhibiting Two Subunits of Cytochrome bc1 in Mycobacterium Tuberculosis // PLoS Pathogens. 2020, v. 16, 1, # e1008270 . doi: 10.1371/journal.ppat.1008270
- Makarov V, Salina E, Reynolds RC, Kyaw Zin PP, Ekins S. Molecule Property Analyses of Active Compounds for Mycobacterium tuberculosis // Journal of Medicinal Chemistry. 2020, v. 63, 17, p. 8917-8955. doi: 10.1021/acs.jmedchem.9b02075
- Maksim M. Kharkov, Andrey V. Kaziev, Daria V. Danilyuk, Margarita S. Kukushkina, Nikolay A. Chernyh, Alexander V. Tumarkin, Dobrynya V. Kolodko. Effects of Ar ion irradiation in an ICP discharge on the titanium surface topology // Applied Surface Science. 2020, v. 527, # 146902 . doi: 10.1016/j.apsusc.2020.146902
- V.V. Babenko, A. Millardb, E.E. Kulikov, N.N. Spasskaya, M.A. Letarova, D.N. Konanova, I.Sh. Belalov, A.V. Letarov. The ecogenomics of dsDNA bacteriophages in feces of stabled and feral horses // Computational and Structural Biotechnology Journal. 2020, v. 18, p. 3457-3467. doi: 10.1016/j.csbj.2020.10.036
- Safenkova I.V., Ivanov A.V., Slutskaya E.S., Samokhvalov A.V., Zherdev A.V., Dzantiev B.B. Key significance of DNA-target size in lateral flow assay coupled with recombinase polymerase amplification // Analytica Chimica Acta. 2020, v. 1102, p. 109-118. doi: 10.1016/j.aca.2019.12.048
- Volkov A. V., Muraev A. A., Zharkova I. I., Voinova V.V., Akoulina E. A., Zhuikov V. A., Khaydapova D. D., Chesnokova D. V., Menshikh K. A., Dudun A.A., Makhina T.K., Bonartseva G.A., Asfarov T.F., Stamboliev I.A., Gazhva Y.V., Ryabova V.M., Zlatev L.H., Ivanov S.Y., Shaitan K.V., Bonartsev A. P. Poly(3-hydroxybutyrate)/hydroxyapatite/alginate scaffolds seeded with mesenchymal stem cells enhance the regeneration of critical-sized bone defect. // MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS. 2020, v. 114, # 110991 . doi: 10.1016/j.msec.2020.110991
- Egorova A., Kazakova E., Jahn B., Ekins S., Makarov V., Schmidtke M. Novel pleconaril derivatives: influence of substituents in the isoxazole and phenyl rings on the antiviral activity against enteroviruses // European Journal of Medicinal Chemistry. 2020, v. 188, # 112007 . doi: 10.1016/j.ejmech.2019.112007
- Buroni S., Makarov V., Scoffone V.C., Trespidi G., Riccardi G., Chiarelli L.R. The cell division protein FtsZ as a cellular target to hit cystic fibrosis pathogens // European Journal of Medicinal Chemistry. 2020, v. 190, # 112132 . doi: 10.1016/j.ejmech.2020.112132
- Maria Uzun, Lolita Alekseeva, Maria Krutkina, Veronika Koziaeva, Denis Grouzdev. Unravelling the diversity of magnetotactic bacteria through analysis of open genomic databases // Scientific data. 2020, v. 71, # 252 . doi: 10.1038/s41597-020-00593-0
- Ivanov A.V., Safenkova I.V., Zherdev A.V., Dzantiev B.B. Nucleic acid lateral flow assay with recombinase polymerase amplification: solutions for high-sensitive detection of RNA virus // Talanta. 2020, v. 210, # 120616 . doi: 10.1016/j.talanta.2019.120616
- Costabile G., Provenzano R., Azzalin A., Scoffone V., Chiarelli L., Rondelli V., Grillo I., Zinn T., Lepioshkin A., Savina S., Miro A., Quaglia F., Makarov V., Coenye T., Brocca P., Riccardi G., Buroni S., Ungaro F. PEGylated mucus-penetrating nanocrystals for lung delivery of a new FtsZ inhibitor against Burkholderia cenocepacia infection // Nanomedicine-Nanotechnology Biology and Medicine. 2020, v. 19, 23, # 102113 . doi: 10.1016/j.nano.2019.102113
- Yadav A.K., Dhiman T.K., Lakshmi G.B.V.S., Berlina A.N., Solanki P.R. A highly sensitive label-free amperometric biosensor for norfloxacin detection based on chitosan-yttria nanocomposite // International Journal of Biological Macromolecules. 2020, v. 151, p. 566-575. doi: 10.1016/j.ijbiomac.2020.02.089
- Haghighi-Poodeh S, Kurganov B, Navidpour L, Yaghmaei P, Ebrahim-Habibi A. Characterization of arginine preventive effect on heat-induced aggregation of insulin // International Journal of Biological Macromolecules. 2020, v. 145, p. 1039-1048. doi: 10.1016/j.ijbiomac.2019.09.196
- Tatiana B. Eronina, ValeriyaV .Mikhaylova, NataliaA. Chebotareva, VladimirV. Shubin, SergeyY. Kleymenov, Boris I. Kurganov. Effect of arginine on stability and aggregation of muscle glycogen phosphorylase b // International Journal of Biological Macromolecules. 2020, v. 165, A, p. 365-374. doi: 10.1016/j.ijbiomac.2020.09.101
- M. Ghahramani, R. Yousefi, A. Krivandin, K. Muranov, B. Kurganov, A.A. Moosavi-Movahedi. Structural and functional characterization of D109H and R69C mutant versions of human aB-crystallin: the biochemical pathomechanism underlying cataract and myopathy development // International Journal of Biological Macromolecules. 2020, v. 146, p. 1142-1160. doi: 10.1016/j.ijbiomac.2019.09.239
- Alexey V. Safonov, Andrei V. Perepelov, Tamara L. Babich, Nadezhda M. Popova, Denis S. Grouzdev, Andrei V. Filatov, Alexander S. Shashkov, Ludmila I. Demina, Tamara N. Nazina. Structure and gene cluster of the O-polysaccharide from Pseudomonas veronii A-6-5 and its uranium bonding // International Journal of Biological Macromolecules. 2020, v. 165, part B, p. 2197-2204. doi: 10.1016/j.ijbiomac.2020.10.038
- Anton G. Rogov, Tatyana N. Goleva, Evgeniya I. Sukhanova, Khoren K. Epremyan, Tatiana A. Trendeleva, Alexandra P. Ovchenkova, Dinara A. Aliverdieva, Renata A. Zvyagilskaya. Mitochondrial Dysfunctions May Be One of the Major Causative Factors Underlying Detrimental Effects of Benzalkonium Chloride // Oxidative Medicine and Cellular Longevity. 2020, v. 2020, # 8956504, p. 1-14. doi: 10.1155/2020/8956504
- Eugene G. Maksimov, Alexey V. Zamaraev, Evgenia Yu. Parshina, Yury B. Slonimskiy, Tatiana A. Slastnikova, Alibek A. Abdrakhmanov, Pavel A. Babaev, Svetlana S. Efimova, Olga S. Ostroumova, Alexey V. Stepanov, Ekaterina A. Slutskaya, Anastasia V. Ryabova, Thomas Friedrich, Nikolai N. Sluchanko. Soluble cyanobacterial carotenoprotein as a robust antioxidant nanocarrier and delivery module // Antioxidants. 2020, v. 9, 9, # 869, p. 1-23. doi: 10.3390/antiox9090869 Sorokin D.Y., Makarova K.S., Abbas B., Ferrer M., Golyshin P.N., Galinski E.A., Ciorda S., Carmen Mena M., Merkel A.Y., Wolf Y.I., van Loosdrecht M.C.M., Koonin E.V. Reply to ‘Evolutionary placement of Methanonatronarchaeia’ // Nature Microbiology. 2019, v. 4, p. 560-561, doi: 10.1038/s41564-019-0358-0.
- Prokhortchouk E, Skryabin KG, Johansson M, Carreras-Torres R, Scelo G, Purdue MP, Mariosa D, Muller DC, Timpson NJ, Haycock PC, Brown KM, Wang Z, Ye Y, Hofmann JN, Foll M, Gaborieau V, Machiela MJ, Colli LM, Li P, Garnier JG, Blanche H, Boland A, Burdette L, Yeager M, Radojevic-Skodric S, Ognjanovic S, Foretova L, Holcatova I, Janout V, Mates D, Mukeriya A, Rascu S, Zaridze D, Bencko V, Cybulski C, Fabianova E, Jinga V, Lissowska J, Lubinski J, Navratilova M, Rudnai P, Benhamou S, Cancel-Tassin G, Cussenot O, Weiderpass E, Ljungberg B, Tumkur Sitaram R, Häggström C, Bruinsma F, Jordan SJ, Severi G, Winship I, Hveem K, Vatten LJ, Fletcher T, Larsson SC, Wolk A, Banks RE, Selby PJ, Easton DF, Andreotti G, Beane Freeman LE, Koutros S, Männistö S, Weinstein S, Clark PE, Edwards TL, Lipworth L, Gapstur SM, Stevens VL, Carol H, Freedman ML, Pomerantz MM, Cho E, Wilson KM, Gaziano JM, Sesso HD, Freedman ND, Parker AS, Eckel-Passow JE, Huang WY, Kahnoski RJ, Lane BR, Noyes SL, Petillo D, Teh BT, Peters U, White E, Anderson GL, Johnson L, Luo J, Buring J, Lee IM, Chow WH, Moore LE, Eisen T, Henrion M, Larkin J, Barman P, Leibovich BC, Choueiri TK, Lathrop GM, Deleuze JF, Gunter M, McKay JD, Wu X, Houlston RS, Chanock SJ, Relton C, Richards JB, Martin RM, Davey Smith G, Brennan P. The influence of obesity-related factors in the etiology of renal cell carcinoma-A mendelian randomization study // PLoS Medicine. 2019, v. 16, № 1, # e1002724, p. 1-16, doi: 10.1371/journal.pmed.1002724.
- Korzhenkov AA, Toshchakov SV, Bargiela R, Gibbard H, Ferrer M, Teplyuk AV, Jones DL, Kublanov IV, Golyshin PN, Golyshina OV. Archaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity // Microbiome. 2019, v. 7, # 11, doi: 10.1186/s40168-019-0623-8.
- Daria A. Kurtina, Alexey V. Garshev, Irina S. Vasil’eva, Vladimir V. Shubin, Alexander M. Gaskov, Roman B. Vasiliev. Atomically thin population of colloidal CdSe nanoplatelets: growth of rolled-up nanosheets and strong circular dichroism induced by ligand exchange // Chemistry of Materials. 2019, v. 31, p. 9652-9663, doi: 10.1021/acs.chemmater.9b02927.
- Wald J., Pasin M., Richter M., Walther C., Mathai N., Kirchmair J., Makarov V.A., Goessweiner-Mohr N., Marlovits T.C., Zanella I., Real-Hohn A., Verdaguer N., Blaas D., Schmidtke M. Cryo-EM structure of pleconaril-resistant rhinovirus-B5 complexed to the antiviral OBR-5-340 reveals unexpected binding site // Proceedings of the National Academy of Sciences of the United States of America. 2019, v. 116, № 38, # 201904732, p. 19109-19115, doi: 10.1073/pnas.1904732116.
- Evgenii N. Frolov, Ilya V. Kublanov, Stepan V. Toshchakov, Evgenii A. Lunev, Nikolay V. Pimenov, Elizaveta A. Bonch-Osmolovskaya, Alexander V. Lebedinsky, Nikolay A. Chernyh. Form III RubisCO-mediated transaldolase variant of the Calvin cycle in a chemolithoautotrophic bacterium // Proceedings of the National Academy of Sciences of the United States of America. 2019, v. 116, № 37, p. 18638-18646, doi: 10.1073/pnas.1904225116.
- Alexander T. Tveit, Anne Grethe Hestnes, Serina L. Robinson, Arno Schintlmeister, Svetlana N. Dedysh, Nico Jehmlich, Martin von Bergen, Craig Herbold, Michael Wagner, Andreas Richter, Mette M. Svenning. Widespread soil bacterium that oxidizes atmospheric methane // Proceedings of the National Academy of Sciences of the United States of America. 2019, v. 116, № 17, p. 8515-8524, doi: 10.1073/pnas.1817812116.
- Karnachuk O.V, Frank Y.A, Lukina A.P, Kadnikov V.V, Beletsky A.V, Mardanov A.V, Ravin N.V. Domestication of previously uncultivated Candidatus Desulforudis audaxviator from a deep aquifer in Siberia sheds light on its physiology and evolution // ISME Journal. 2019, v. 13, № 8, p. 1947-1959, doi: 10.1038/s41396-019-0402-3.
- Antonov IV, Mazurov E, Borodovsky M, Medvedeva YA. Prediction of lncRNAs and their interactions with nucleic acids: benchmarking bioinformatics tools // Briefings in Bioinformatics. 2019, v. 20, № 2, p. 551-564, doi: 10.1093/bib/bby032.
- Khlebtsov B.N., Bratashov D.N., Byzova N.A., Dzantiev B.B., Khlebtsov N.G. SERS-based lateral flow immunoassay of troponin I using gap-enhanced Raman tags // Nano Research. 2019, v. 12, № 2, p. 413-420, doi: 10.1007/s12274-018-2232-4.
- Mariia G. Gordienko, Vera V. Palchikova, Sergei V. Kalenov, Alexey A. Belov, Veronika N. Lyasnikova, Daniil Y. Poberezhniy, Alina V. Chibisova, Vladimir V. Sorokin, Dmitry A. Skladnev. Antimicrobial activity of silver salt and silver nanoparticles in different forms against microorganisms of different taxonomic groups // Journal of Hazardous Materials. 2019, v. 378, # 120754, p. 1-11, doi: 10.1016/j.jhazmat.2019.120754.
- de Rink R., Klok J.B.M., van Heeringen G.J., Sorokin D.Y., ter Heijne A., Zeijlmaker R., Mos Y.M., de Wilde V., Keesman K.J., Buisman C.J.N. Increasing the selectivity for sulfur formation in biological gas desulfurization // Environmental Science and Technology. 2019, v. 53, p. 4519-4527, doi: 10.1021/acs.est.8b06749.
- Puhl A.C., Garzino Demo A., Makarov V.A., Ekins S. New targets for HIV drug discovery // Drug Discovery Today. 2019, v. 24, № 5, p. 1139-1147, doi: 10.1016/j.drudis.2019.03.013.
- Vavourakis C.D., Mehrshad M., Balkema C., van Hall R., Andrei A-S., Ghai R., Sorokin D.Y., Muyzer G. Metagenomes and metatranscriptomes shed new light on the microbial-mediated sulfur cycle in a Siberian soda lake // BMC Biology. 2019, № 17, # 69, doi: 10.1186/s12915-019-0688-7.
- Short S.P., Barrett C.W., Stengel K.R., Revetta F.L., Choksi Y.A., Coburn L.A., Lintel M.K., McDonough E.M., Washington M.K., Wilson K.T., Prokhortchouk E., Chen X., Hiebert S.W., Reynolds A.B., Williams C.S. Kaiso is required for MTG16-dependent effects on colitis-associated carcinoma // Oncogene. 2019, v. 38, № 25, p. 5091-5106, doi: 10.1038/s41388-019-0777-7.
- Berlina A.N., Komova N.S., Zherdev A.V., Dzantiev B.B. Application of aptamers for the determination of heavy metals // Molecular Therapy-Nucleic Acids. 2019, v. 17, suppl. 1, p. 15-16, doi: 10.1016/j.omtn.2019.07.010.
- Safenkova I.V., Samokhvalov A.V., Zherdev A.V., Dzantiev B.B. New opportunities of aptamers’ use in assays of mycotoxins // Molecular Therapy-Nucleic Acids. 2019, v. 17, suppl. 1, p. 15-15, doi: 10.1016/j.omtn.2019.07.010.
- Berlina A.N., Zherdev A.V., Dzantiev B.B. Progress in rapid optical assays for heavy metal ions based on the use of nanoparticles and receptor molecules // Microchimica Acta. 2019, v. 186, № 3, # 172, doi: 10.1007/s00604-018-3168-9.
- Ivanov A.V., Safenkova I.V., Zherdev A.V., Dzantiev B.B. Recombinase polymerase amplification combined with a magnetic nanoparticle-based immunoassay for fluorometric determination of troponin T // Microchimica Acta. 2019, v. 186, № 8, # 549, doi: 10.1007/s00604-019-3686-0.
- Can Altınelataman, Olga Koroleva, Tatyana Fedorova, Anna Torkova, Ksenia Lisitskaya, Mikhail Tsentalovich, Aleksey Kononikhin, Igor Popov, Daria Vasina, Leonid Kovalyov, Ufuk Çelik. An in vitro and in silico study on the antioxidant and cell culture-based study on the chemoprotective activities of fish muscle protein hydrolysates obtained from European seabass and gilthead seabream // Food Chemistry. 2019, v. 271, p. 724-732, doi: 10.1016/j.foodchem.2018.08.004.
- Sergey Y. Bershitsky, Daria S. Logvinova, Daniil V. Shchepkin, Galina V. Kopylova, Alexander M. Matyushenko. Myopathic mutations in the β-chain of tropomyosin differently affect the structural and functional properties of ββ- and αβ-dimers // FASEB Journal. 2019, v. 33, № 2, p. 1 963-1 971, doi: 10.1096/fj.201800755R.
- Camilla L. Nesbø, Rhianna Charchuk, Stephen M. J. Pollo, Karen Budwill, Ilya V. Kublanov, Thomas H.A. Haverkamp, Julia Foght. Genomic analysis of the mesophilic Thermotogae genus Mesotoga reveals phylogeographic structure and genomic determinants of its distinct metabolism // Environmental Microbiology. 2019, v. 21, № 1, p. 456-470, doi: 10.1111/1462-2920.14477.
- Isupov M.N., Boyko K.M., Sutter J-M., James P., Sayer C., Schmidt M., Schönheit P., Nikolaeva A.Yu., Stekhanova T.N., Mardanov A.V., Ravin N.V., Bezsudnova E.Yu., Popov V.O., Littlechild J.A. Thermostable Branched-Chain Amino Acid Transaminases From the Archaea Geoglobus acetivorans and Archaeoglobus fulgidus: Biochemical and Structural Characterization // Frontiers in Bioengineering and Biotechnology. 2019, v. 7, # 7, p. 1-16, doi: 10.3389/fbioe.2019.00007.
- Skryabin K, Ravin N, Mardanov A, Beletsky A, Salina E, Rakitin A, Kadnikov V, Abrouk M, Alfama F, Adam-Blondon AF, Alberti A, Aury JM, Alaux M, Akpinar BA, Arnaud D, Appels R, Batley J, Bayer PE, Barad O, Baruch K, Balfourier F, Borrill P, Ben-Zvi G, Bartoš J, Barabaschi D, Budak H, Belova T, Biyiklioglu S, Benhamed M, Bendahmane A, Bellec A, Berges H, Balcárková B, Barbe V, Couloux A, Cruaud C, Condie J, Choulet F, Chhuneja P, Chaudhary C, Clark MD, Concia L, Číhalíková J, Čížková J, Cuthbert R, Cattivelli L, Cattonaro F, Cui L, Chalabi S, Chalhoub B, Cory A, Datla R, Du X, Davey MW, Distelfeld A, Darrier B, Doležel J, Edwards D, Eversole K, Ens J, Feng K, Fischer I, Felder M, Frenkel Z, Fahima T, Feuillet C, Flores R, Glikson V, Galvez S, Golds T, Gao L, Gutierrez-Gonzalez J, Guerche C, Gupta OP, Guilhot N, Gundlach H, Haberer G, Himmelbach A, Holušová K, Heavens D, Hayashi S, Hayden M, Handa H, Hernandez P, Hu Y, Jones JDG, Jindal S, Josselin AA, Juhász A, Jacobs J, Jiumeng M, Kanyuka K, King R, Knox R, Kubaláková M, Khurana J, Khurana P, Kaur G, Kaur P, Kaithakottil G, Katagiri S, Kanamori H, Kumar V, Keeble-Gagnère G, Keller B, Koh C, Korol A, Kobayashi F, Kugler K, Kettleborough G, Keilwagen J, Latrasse D, Letellier T, Loaec M, Labadie K, Luo M, Leroy P, Lux T, Mascher M, Melonek J, Maclachlan R, Mangenot S, Malik P, Mahato A, Mathur S, Mayer KFX, Muehlbauer G, Nilsen K, N’Daiye A, Nesterov M, Nasuda S, Nie X, Ormanbekova D, Olsen OA, Pozniak CJ, Prade V, Pasam RK, Poland J, Paux E, Plíhal O, Pfeifer M, Quesneville H, Rimbert H, Ramirez-Gonzalez RH, Rigault P, Rogers J, Robinson SJ, Ronen G, Raats D, Rohde A, Sehgal S, Singh NK, Spannagl M, Stein N, Sevanthi A, Sharma N, Sharma P, Steuernagel B, Swarbreck D, Sharpe AG, Singh K, Sourdille P, Small I, Šafář J, Sergeeva E, Sandve S, Tibbits J, Tiwari V, Twardziok S, Toegelová H, Tan Y, Tomar RS, Tulpová Z, Tanaka T, Tong W, Uauy C, van Ex F, Venturini L, Visendi P, Valárik M, van der Vossen E, Vautrin S, Vrána J, Walkowiak S, Wu J, Wright J, Wincker P, Wang L, Witek K, Weining S, Wulff BBH, Wiebe K, Xiang D, Xun X, Yu G, Yadav B, Zhan B, Zhou R. Shifting the limits in wheat research and breeding using a fully annotated reference genome. // Science, 2018, v. 361, #6403, p. 1-16 (doi 10.1126/science.aar7191).
- Nikolai N. Sluchanko, Yury B. Slonimskiy, Evgeny A. Shirshin, Marcus Moldenhauer, Thomas Friedrich, Eugene G. Maksimov. OCP-FRP protein complex topologies suggest a mechanism for controlling high light tolerance in cyanobacteria. // Nature Communications, 2018, v. 9, p. 1-15 (doi 10.1038/s41467-018-06195-0).
- Abdullah M Khamis, Olaa Motwalli, Oliva Romina, Boris R Jankovic, Yulia A Medvedeva, Magbubah Essack, Xin Gao, Vladimir B Bajic. A novel method for improved accuracy of transcription factor binding site prediction. // Nucleic Acids Research, 2018, v. 46, # 12, art. е72 (doi.org/10.1093/nar/gky237).
- Wohlgemuth R, Littlechild J, Monti D, Schnorr K, van Rossum T, Siebers B, Menzel P, Kublanov IV, Rike AG, Skretas G, Szabo Z, Peng X, Young MJ. Discovering novel hydrolases from hot environments, // Biotechnology Advances, 2018, v. 36, #8, p. 2077‑2100 (doi 10.1016/j.biotechadv.2018.09.004).
- Vavourakis C.D., Andrei A.-S., Mehrshad M., Ghai R., Sorokin D.Y., Muyzer G. A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments. // Microbiome, 2018, v. 6, p. 1-18 (doi.org/10.1186/s40168-018-0548-7:).
- Bobrowski T, Arribas EG, Ludwig R, Toscano MD, Shleev S, Schuhmann W. Rechargeable, flexible and mediator-free biosupercapacitor based on transparent ITO nanoparticle modified electrodes acting in mu M glucose containing buffers. // Biosensors and Bioelectronics, 2018, v. 101, p. 84-89 (doi 10.1016/j.bios.2017.10.016).
- Talan A., Mishra A., Eremin S.A., Narang J., Kumar A., Gandhi S. Ultrasensitive electrochemical immuno-sensing platform based on gold nanoparticles triggering chlorpyrifos detection in fruits and vegetables. // Biosensors and Bioelectronics. 2018, v. 105, p. 14-21 (doi 10.1016/j.bios.2018.01.013).
- Kits K.D., Sedlacek C.J., Lebedeva E.V., Han P., Bulaev A., Pjevac P., Daebeler A., Romano S., Albertsen M., Stein L.Y., Daims H., Wagner M. Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle. // NATURE. 2017, v. 549, № 7671, p. 269-272.
- Chung-Chau Hon, Jordan A Ramilowski, Jayson Harshbarger, Nicolas Bertin, Owen JL Rackham, Julian Gough, Elena Denisenko, Sebastian Schmeier, Thomas M Poulsen, Jessica Severin, Marina Lizio, Hideya Kawaji, Takeya Kasukawa, Masayoshi Itoh, A Maxwell Burroughs, Shohei Noma, Sarah Djebali, Tanvir Alam, Yulia A Medvedeva, Alison C Testa, Leonard Lipovich, Chi-Wai Yip, Imad Abugessaisa, Mickaël Mendez, Akira Hasegawa, Dave Tang, Timo Lassmann, Peter Heutink, Magda Babina, Christine A Wells, Soichi Kojima, Yukio Nakamura, Harukazu Suzuki, Carsten O Daub, Michiel JL de Hoon, Erik Arner, Yoshihide Hayashizaki, Piero Carninci, Alistair RR Forrest. An atlas of human long non-coding RNAs with accurate 5′ ends. // NATURE. 2017, v. 543, № 7644, p. 199-204.
- Derek de Rie, Imad Abugessaisa, Tanvir Alam, Erik Arner, Peter Arner, Haitham Ashoor, Gaby Åström, Magda Babina, Nicolas Bertin, A Maxwell Burroughs, Ailsa J Carlisle, Carsten O Daub, Michael Detmar, Ruslan Deviatiiarov, Alexandre Fort, Claudia Gebhard, Daniel Goldowitz, Sven Guhl, Thomas J Ha, Jayson Harshbarger, Akira Hasegawa, Kosuke Hashimoto, Meenhard Herlyn, Peter Heutink, Kelly J Hitchens, Chung Chau Hon, Edward Huang, Yuri Ishizu, Chieko Kai, Takeya Kasukawa, Peter Klinken, Timo Lassmann, Charles-Henri Lecellier, Weonju Lee, Marina Lizio, Vsevolod Makeev, Anthony Mathelier, Yulia A Medvedeva, Niklas Mejhert, Christopher J Mungall, Shohei Noma, Mitsuhiro Ohshima, Mariko Okada-Hatakeyama, Helena Persson, Patrizia Rizzu, Filip Roudnicky, Pål Sætrom, Hiroki Sato, Jessica Severin, Jay W Shin, Rolf K Swoboda, Hiroshi Tarui, Hiroo Toyoda, Kristoffer Vitting-Seerup, Louise Winteringham, Yoko Yamaguchi, Kayoko Yasuzawa, Misako Yoneda, Noriko Yumoto, Susan Zabierowski, Peter G Zhang, Christine A Wells, Kim M Summers, Hideya Kawaji, Albin Sandelin, Michael Rehli, Yoshihide Hayashizaki, Piero Carninci, Alistair RR Forrest, Michiel JL de Hoon, FANTOM Consortium. An integrated expression atlas of miRNAs and their promoters in human and mouse. // Nature Biotechnology. 2017, v. 35, № 9, p. 872-878.
- Mitchell J. Machiela, Jonathan N. Hofmann, Robert Carreras-Torres, Kevin M. Brown, Mattias Johansson, Zhaoming Wang, Matthieu Foll, Peng Li, Nathaniel Rothman, Sharon A. Savage, Valerie Gaborieau, James D. McKay, Yuanqing Ye, Marc Henrion, Fiona Bruinsma, Susan Jordan, Gianluca Severi, Kristian Hveem, Lars J. Vatten, Tony Fletcher, Kvetoslava Koppova, Susanna C. Larsson, Alicja Wolk, Rosamonde E. Banks, Peter J. Selby, Douglas F. Easton, Paul Pharoah, Gabriella Andreotti, Laura E. Beane Freeman, Stella Koutros, Demetrius Albanes, Satu Mannisto, Stephanie Weinstein, Peter E. Clark, Todd E. Edwards, Loren Lipworth, Susan M. Gapstur, Victoria L. Stevens, Hallie Carol, Matthew L. Freedman, Mark M. Pomerantz, Eunyoung Cho, Peter Kraft, Mark A. Preston, Kathryn M. Wilson, J. Michael Gaziano, Howard S. Sesso, Amanda Black, Neal D. Freedman, Wen-Yi Huang, John G. Anema, Richard J. Kahnoski, Brian R. Lane, Sabrina L. Noyes, David Petillo, Leandro M. Colli, Joshua N. Sampson, Celine Besse, Helene Blanche, Anne Boland, Laurie Burdette, Egor Prokhortchouk, Konstantin G. Skryabin, Meredith Yeager, Mirjana Mijuskovic, Miodrag Ognjanovic, Lenka Foretova, Ivana Holcatova, Vladimir Janout, Dana Mates, Anush Mukeriya, Stefan Rascu, David Zaridze, Vladimir Bencko, Cezary Cybulski, Eleonora Fabianova, Viorel Jinga, Jolanta Lissowska, Jan Lubinski, Marie Navratilova, Peter Rudnai, Neonila Szeszenia-Dabrowska, Simone Benhamou, Geraldine Cancel-Tassin, Olivier Cussenot, H. Bas Bueno-de-Mesquita, Federico Canzian, Eric J. Duell, Bo¨rje Ljungberg, Raviprakash T. Sitaram, lrike Peters, Emily White, Garnet L. Anderson, Lisa Johnson, Juhua Luo, Julie Buring, I-Min Lee, Wong-Ho Chow, Lee E. Moore, Christopher Wood, imothy Eisen, James Larkin, Toni K. Choueiri, G. Mark Lathrop, Bin Tean Teh, ean-Francois Deleuze, Xifeng Wu, Richard S. Houlston, Paul Brennan, Stephen J. Chanock, Ghislaine Scelo, Mark P. Purdue. Genetic Variants Related to Longer Telomere Length are Associated with Increased Risk of Renal Cell Carcinoma. // European Urology. 2017, v. 72, № 5, p. 747-754.
- Artemov A.V., Mugue N.S., Rastorguev S.M., Zhenilo S., Mazur A.M., Tsygankova S.V., Boulygina E.S., Kaplun D., Nedoluzhko A.V., Medvedeva Y.A., Prokhortchouk E.B. Genome-Wide DNA Methylation Profiling Reveals Epigenetic Adaptation of Stickleback to Marine and Freshwater Conditions. // Molecular Biology and Evolution. 2017, v. 9, № 34, p. 2203-2213.
- Golyshina OV, Toshchakov SV, Makarova KS, Gavrilov SN, Korzhenkov AA, La Cono V, Arcadi E, Nechitaylo TY, Ferrer M, Kublanov IV, Wolf YI, Yakimov MM, Golyshin PN. ‘ARMAN’ archaea depend on association with euryarchaeal host in culture and in situ. // Nature Communications. 2017, v. 8, № 1, № article 60, p. 1-12.
- Ghislaine Scelo, Mark P. Purdue, Kevin M. Brown, Mattias Johansson, Zhaoming Wang, Jeanette E. Eckel-Passow, Yuanqing Ye, Jonathan N. Hofmann, Jiyeon Choi, Matthieu Foll, Valerie Gaborieau, Mitchell J. Machiela, Leandro M. Colli, Peng Li, Joshua N. Sampson, Behnoush Abedi-Ardekani, Celine Besse, Helene Blanche, Anne Boland, Laurie Burdette, Amelie Chabrier, Geoffroy Durand, Florence Le Calvez-Kelm, Egor Prokhortchouk, Nivonirina Robinot, Konstantin G. Skryabin, Magdalena B. Wozniak, Meredith Yeager, Gordana Basta-Jovanovic, Zoran Dzamic, Lenka Foretova, Ivana Holcatova, Vladimir Janout, Dana Mates, Anush Mukeriya, Stefan Rascu, David Zaridze, Vladimir Bencko, Cezary Cybulski, Eleonora Fabianova, Viorel Jinga, Jolanta Lissowska, Jan Lubinski, Marie Navratilova, Peter Rudnai, Neonila Szeszenia-Dabrowska, Simone Benhamou, Geraldine Cancel-Tassin, Olivier Cussenot, Laura Baglietto, Heiner Boeing, Kay-Tee Khaw, Elisabete Weiderpass, Borje Ljungberg, Raviprakash T. Sitaram, Fiona Bruinsma, Susan J. Jordan, Gianluca Severi, Ingrid Winship, Kristian Hveem, Lars J. Vatten, Tony Fletcher, Kvetoslava Koppova, Susanna C. Larsson, Alicja Wolk, Rosamonde E. Banks, Peter J. Selby, Douglas F. Easton, Paul Pharoah, Gabriella Andreotti, Laura E. Beane Freeman, Stella Koutros, Demetrius Albanes, Satu Ma¨nnisto, Stephanie Weinstein, Peter E. Clark, Todd L. Edwards, Loren Lipworth, Susan M. Gapstur, Victoria L. Stevens, Hallie Carol, Matthew L. Freedman, Mark M. Pomerantz, Eunyoung Cho, Peter Kraft, Mark A. Preston, Kathryn M. Wilson, J. Michael Gaziano, Howard D. Sesso, Amanda Black, Neal D. Freedman, Wen-Yi Huang, John G. Anema, Richard J. Kahnoski, Brian R. Lane, Sabrina L. Noyes, David Petillo, Bin Tean Teh, Ulrike Peters, Emily White, Garnet L. Anderson, Lisa Johnson, Juhua Luo, Julie Buring, I-Min Lee, Wong-Ho Chow, Lee E. Moore, Christopher Wood, Timothy Eisen, Marc Henrion, James Larkin, Poulami Barman, Bradley C. Leibovich, Toni K. Choueiri, G. Mark Lathrop, Nathaniel Rothman, Jean-Francois Deleuze, James D. McKay, Alexander S. Parker, Xifeng Wu, Richard S. Houlston, Paul Brennan, Stephen J. Chanock. Genome-wide association study identifies multiple risk loci for renal cell carcinoma. // Nature Communications. 2017, v. 8, № article 15 724.
- Sorokin D, Messina E, Smedile F, Roman P, Sinninghe-Damste J, Golyshin P, Ciordia S, Mena M, Ferrer M, Kublanov I, Samarov N, Toshchakov S., La Cono V, Yakimov M. Discovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats. // The ISME Journal: Multidisciplinary journal of microbial ecology. 2017, v. 11, № 5, p. 1245-1260.
- Lizio, Marina; Harshbarger, Jayson; Abugessaisa, Imad; Noguchi, Shuei; Kondo, Atsushi; Severin, Jessica; Mungall, Chris; Arenillas, David; Mathelier, Anthony; Medvedeva, Yulia A.; Lennartsson, Andreas; Drablos, Finn; Ramilowski, Jordan A.; Rackham, Owen; Gough, Julian; Andersson, Robin; Sandelin, Albin; Ienasescu, Hans; Ono, Hiromasa; Bono, Hidemasa; Hayashizaki, Yoshihide; Carninci, Piero; Forrest, Alistair R. R.; Kasukawa, Takeya; Kawaji, Hideya . // Nucleic Acids Research. 2017, v. 45, № D1, p. D737-D743.
- Smith L.J., Bochkareva A., Rolfe M.D., Hunt D.M., Kahramanoglou C., Braun Y., Rodgers A., Blockley A., Coade S., Lougheed K.E.A., Hafneh N.A., Glenn S.M., Crack J.C., LeBrun N.E., Saldanha J.W., Makarov V., Nobeli I., Arnvig K., Mukamolova G.V., Buxton R.S., Green J. Cmr is a redox-responsive regulator of DosR that contributes to M. tuberculosis virulence. // Nucleic Acids Research. 2017, v. 45, № 11, p. 6600-6612.
- Sorokin D.Y., Makarova K.S, Abbas B., Ferrer M., Golyshin P.N., Galinski E.A., Ciordia S., Mena M.C., Merkel A.Y., Wolf Y.I., van Loosdrecht M.C.M., Koonin E.V. Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis. // Nature Microbiology. 2017, v. 2, № 8, № article 17081.
- Taylor, Nicholas M. I., Prokhorov, Nikolai S., Guerrero-Ferreira, Ricardo C., Shneider, Mikhail M., Browning, Christopher, Goldie, Kenneth N., Stahlberg, Henning, Leiman, Petr G. Structure of the T4 baseplate and its function in triggering sheath contraction. // NATURE, 2016, v. 533, n. 7603, pp. 346-352.
- Daelman, Matthijs R. J., Sorokin, Dimitry, Kruse, Olaf, van Loosdrecht, Mark C. M., Strous, Marc Haloalkaline Bioconversions for Methane Production from Microalgae Grown on Sunlight. // Trends in Biotechnology, 2016, v. 34, n. 6, pp. 450-457.
- Thiaville, Jennifer J., Kellner, Stefanie M., Yuan, Yifeng, Hutinet, Geoffrey, Thiaville, Patrick C., Jumpathong, Watthanachai, Mohapatra, Susovan, Brochier-Armanet, Celine, Letarov, Andrey V., Hillebrand, Roman, Malik, Chanchal K., Rizzo, Carmelo J., Dedon, Peter C., de Crecy-Lagard, Valerie Novel genomic island modifies DNA with 7-deazaguanine derivatives. // Proceedings of the National Academy of Sciences of the USA (PNAS). 2016, v. 113, n. 11, pp. E1452-E1459.
- Danilova, Olga V., Suzina, Natalia E., Van De Kamp, Jodie, Svenning, Mette M., Bodrossy, Levente, Dedysh, Svetlana N. A new cell morphotype among methane oxidizers: a spiral-shaped obligately microaerophilic methanotroph from northern low-oxygen environments. // ISME JOURNAL, 2016, v. 10, n. 11, pp. 2734-2743.
- Sorokin, Dimitry Y., Kublanov, Ilya V., Gavrilov, Sergei N., Rojo, David, Roman, Pawel, Golyshin, Peter N., Slepak, Vladlen Z., Smedile, Francesco, Ferrer, Manuel, Messina, Enzo, La Cono, Violetta, Yakimov, Michail M. Elemental sulfur and acetate can support life of a novel strictly anaerobic haloarchaeon. // ISME JOURNAL, 2016, v. 10, n. 1, pp. 240-252.
- Kulakovskiy, Ivan V., Vorontsov, Ilya E., Yevshin, Ivan S., Soboleva, Anastasiia V., Kasianov, Artem S., Ashoor, Haitham, Ba-alawi, Wail, Bajic, Vladimir B., Medvedeva, Yulia A., Kolpakov, Fedor A., Makeev, Vsevolod J. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. // NUCLEIC ACIDS RESEARCH, 2016, v. 44, n. D1, pp. D116-D125.
- Urusov, Alexandr E., Petrakova, Alina V., Zherdev, Anatoly V., Dzantiev, Boris B. Multistage in one touch design with a universal labelling conjugate for high-sensitive lateral flow immunoassays. BIOSENSORS & BIOELECTRONICS, 2016, v. 86, pp. 575-579.
- Daims H., Lebedeva E., Pjevae P., Han P., Herbold C., Albertsen M., Jehmlich N., Palatinszky M., Jierheilig J., Bulaev A., Kirkegaard R., van Bergen M., Rattei T., Berndinger B., Nielsen P., Wagner M. (2015) Complete nitrification by Nitrospira bacteria. // NATURE. v. 528 (7583) p. 504-509. doi:10.1038/nature16461
- Muntyan M.S., Cherepanov D.A., Malinen A.M., Bloch D.A., Sorokin D.Y., Severina I.I., Ivashina T.V., Lahti R., Muyzer G., Skulachev V.P. (2015) Cytochrome cbb3 of Thioalkalivibrio is a Na+-pumping cytochrome oxidase. // Proceedings of the National Academy of Sciences of the USA (PNAS). 112 7695–7700
- BattulinN, FishmanVS, Mazur AM, Pomaznoy М, Khabarova AA, AfonnikovDA, Prokhortchouk EB, Serov OL. (2015) Comparison of the three-dimensional organization of sperm and fibroblast genomes using the Hi-C approach. // Genome biology. v. 16 77, doi:10.1186/s13059-015-0642-0
- Oshkin I.Y., Beck D.A., Lamb A.E., Tchesnokova V., Benuska G., McTaggart T.L., Kalyuzhnaya M.G., Dedysh S.N., Lidstrom M.E., Chistoserdova L. (2015) Methane-fed microbial microcosms show differential community dynamics and pinpoint taxa involved in communal response. // ISME Journal. V. 9(5), p. 1119-1129
- Nesbø C.L., Haverkamp T.H.A., Swithers K.S., Dahle H., Birkeland N.-K., Sokolova T., Kublanov I., Zhaxybayeva O. (2015) Evidence for extensive gene flow and thermotoga subpopulations in subsurface and marine environments. // ISME Journal: Multidisciplinary journal of microbial ecology. Т. 9. № 7. p. 1532-1542
- Tammis J., Sorokin D.Y., Jiang Y., van Loosdrecht M.C.M., Kleerbazem R. (2015) Lipid recovery from a vegetable oil emulsion using microbial enrichment culture. // Biotechnology for Biofuels. 8 39 (DOI 10.1186/s13068-015-0228-9)
- Martin Carlos, Volkov Pavel V., Rozhkova Aleksandra M., Puls Jürgen, Sinitsyn Arkady P. (2015) Comparative study of the enzymatic convertibility of glycerol- anddilute acid-pretreated sugarcane bagasse using Penicillium- andTrichoderma-based cellulase preparations. // Industrial Crops and Products. v.77, p.382–390
- Zvereva E.A., Kovalev L.I., Ivanov A.V., Kovaleva M.A., Zherdev A.V., Shishkin S.S., Lisitsyn A.B., Chernukha I.M., Dzantiev B.B. (2015) Enzyme immunoassay and proteomic characterization of troponin I as a marker of mammalian muscle compounds in raw meat and some meat products. // Meat Science. v. 105, p. 46-52
- Anisimkin V.I., Kuznetsova I.E., Kolesov V.V., Skladnev.D. A, Sorokin V.V. (2015) Detection of Small Amounts of Bacteria in Micro-Litre Liquid Samples Using Acoustic Modes in Piezoelectric Plates with Free Faces. // Ultrasonics. V. 62. P. 156–159
- Pankratov D., Sundberg R., Sotres J., Maximov I., Graczyk M., Suyatin D.B., Gonzalez-Arribas E., Lipkin A., Montelius L., Shleev S. (2015) Transparent and flexible, nanostructured and mediatorlessglucose/oxygen enzymatic fuel cells. // Journal of Power Sources. v. 294, p. 501-506
- Taranova N.A., Berlina A.N., Zherdev A.V., Dzantiev B.B. (2015) Traffic light” immunochromatographic test based on multicolor quantum dots for simultaneous detection of several antibiotics in milk. // Biosensors & Bioelectronics. v. 63, p. 255-261
- Andaine Seguin-Orlando, Cristina Gamba,Clio Der Sarkissian, Luca Ermini, Guillaume Louvel, Eugenia Boulygina, Alexey Sokolov, Artem Nedoluzhko, Eline D. Lorenzen, Patricio Lopez, H. Gregory McDonald, Eric Scott8, Alexei Tikhonov, Thomas W. Stafford, Jr1 , Ahmed H. Alfarhan, Saleh A. Alquraishi, Khaled A. S. Al-Rasheid, Beth Shapiro, Eske Willerslev1, Egor Prokhortchouk & Ludovic Orlando (2015) Pros and cons of methylationbased enrichment methods for ancient DNA. // Scientific Reports. 5, 1186. Article number: 11826, doi 10.1038/srep11826
- Serpionov GV, Alexandrov AI, Antonenko YN, Ter-Avanesyan MD (2015) A protein polymerization cascade mediates toxicity of non-pathological human huntingtin in yeast. // Scientific Reports. v. 5 p. 18407. doi: 10.1038/srep18407
- Bogomazova AN, Vassina EM, Goryachkovskaya TN, Popik VM, Sokolov AS, Kolchanov NA, Lagarkova MA, Kiselev SL, Peltek SE. (2015) No DNA damage response and negligible genome-wide transcriptional changes in human embryonic stem cells exposed to terahertz radiation. // Scientific Reports. v. 5 7749
- Zubareva A.A., Shcherbinina T.S., Varlamov V.P., Svirshchevskaya E.V. (2015) Intracellular sorting of differently charged chitosan derivatives and chitosan-based nanoparticles. // Nanoscale. v.7, p.7942-7962 DOI: 10.1039/c5nr00327
- Skryabin KG, Kuznetsov BB, Ravin NV, Kolganova TV, Beletsky AV, Mardanov AV, Visser RG. Potato Genome Sequencing Consortium. // Nature. 2011. 475(7355):189 195
- International Cancer Genome Consortium, Prokhortchouk E, Skryabin K, Yang H. International network of cancer genome projects. // Nature. 2010. 464(7291):993-998
- Kim Y.J., Lee H.S., Kim E.S., Bae S.S., Lim J.K., Matsumi R., Lebedinsky A.V., Sokolova T.G., Kozhevnikova D.A., Cha S.-S., Kim S.-J., Kwon K.K., Imanaka T., Atomi H., Bonch-Osmolovskaya E.A., Lee J.-H., Kang S.G. Formate-driven growth coupled with H2 production. // Nature, 2010, 467:352-355
- Scelo G, Mazur A, Skryabin K, Prokhortchouk E, Lathrop GM. Variation in genomic landscape of clear cell renal cell carcinoma across Europe. // Nature Commun. 2014. 5:5135
- Purdue MP, Prokhortchouk E, Mazur AM, Chekanov NN, Skryabin KG, Brennan P. Genome-wide association study of renal cell carcinoma identifies two susceptibility loci on 2p21 and 11q13.3. // Nature Genet. 2011. 43(1):60-65
- Makarov, Vadim; Manina, Giulia; Mikusova, Katarina; Moellmann, Ute; Ryabova, Olga et al. Benzothiazinones Kill Mycobacterium tuberculosis by Blocking Arabinan Synthesis. // Science. 2009, v. 324, p. 801-804
- Michaelis W., Seifert R., Nauhaus K., Treude T., Thiel V., Blumenberg M., Knittel K., Gieseke A., Peterknecht K., Pape T., Boetius A., Amann R., Jørgensen B.B., Widdel F., Peckmann J., Pimenov N.V., Gulin M.B. Microbial reefs in the Black Sea fueled by anaerobic oxidation of methane. // Science, 2002, Vol. 297, N 5583, pp. 1013-1015
- Hatzenpichler R., Lebedeva E.V., Spieck E., Stoecker K., Richter A., Daims H., Wagner M. A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. // Proc. Natl. Acad. Sci. USA, 2008, V 105, N 6, pp. 2134–2139
- Ferrario S., Immink R.G.H., Shchennikova A., Busscher-Lange J., Angenent G.C. The MADS box gene FBP2 is required for the SEPALLATA function in petunia. // Plant Cell J. 2003. 15(4):914-925
- Fokina A.V., Sokolov S.S., Kang H.A., Kalebina T.A., Ter-Avanesyan M.D., Agaphonov M.O. Inactivation of Pmc1 vacuolar Ca2+ ATPase causes G2 cell cycle delay in Hansenula polymorpha. // Cell Cycle. 2012, 11: 778-784
- Trofimov A.A., Polyakov K.M., Tikhonova T.V., Tikhonov A.V., Safonova, Boyko K.M., Dorovatovskii P.V., Popov V.O. Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. // Acta Crystallographica. Section D: Biological Crystallograph. 2012, v. 68, № 2, 144–153
- Afanasieva EG, Kushnirov VV, Tuite MF, Ter-Avanesyan MD. Molecular basis for transmission barrier and interference between closely related prion proteins in yeast. // Journal of Biological Chemistry. 2011; 286:15773-15780
- Nevzorov I.A., Nikolaeva O.P., Kainov Y.A., Redwood C.S., Levitsky D.I. Conserved non-canonical residue Gly-126 confers instability to the middle part of the tropomyosin molecule. // Journal of Biological Chemistry, 2011, v. 286, No. 18, p. 15766–15772
- Ravin, V., Ravin, N., Casjens, S., Ford, M., Hatfull, G., & Hendrix, R. Genomic sequence and analysis of the atypical bacteriophage N15. // J. Mol. Biol. 2000. 299, 53-73
- Mardanov A.V., Ravin N.V., Kuznetsov B.B., Samigullin T.H., Antonov A.S., Kolganova T.V., Skryabin K.G. Complete sequence of the duckweed (Lemna minor) chloroplast genome: structural organisation and phylogenetic relationships to other angiosperms. // J. Mol. Evol., 2008, 66(6), 555-564
- Mukamolova, GV; Turapov, OA; Young, DI; Kaprelyants, AS; Kell, DB; Young, M. A family of autocrine growth factors in Mycobacterium tuberculosis. // Molecular Microbiology. 2002, v. 46, p. 623-635
- Nazina T.N., Tourova T.P., Poltaraus A.B., Novikova E.V., Grigoryan A.A., Ivanova A.E., Lysenko A.M., Petrunyaka V.V., Osipov G.A., Belyaev S.S., Ivanov M.V. Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. th. // Int. J. Syst. Evol. Microbiol. 2001, 51(Pt 2), pp. 433-446
- Podosokorskaya O.A., Kadnikov V.A., Gavrilov S.N., Mardanov A.V., Karnachuk O.V., Ravin N.A., Bonch-Osmolovskaya E.A., Kublanov I.V. Characterization of Melioribacter roseus gen. nov., sp. nov., a novel facultatively anaerobic thermophilic cellulolytic bacterium from the class Ignavibacteria, and a proposal of a novel bacterial phylum Ignavibacteriae. // Environmental Microbiology. 2013, 15:1759-71
- Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V., Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G. Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis. // Appl. Environ. Microbiol. 2009, 75(13), pp. 4580-8. doi: 10.1128/AEM.00718-09.–151
- Dotsenko G.S., Sinitsyna O.A., Hinz S., Wery J., Sinitsyn A.P. Bifunctional β-glycoside hydrolase GH family 3 from Chrysosporium lucknowense. Characterization of a GH family 3 beta-glycoside hydrolase from Chrysosporium lucknowense and its application to the hydrolysis of beta-glucan and xylan. // Bioresource Technology. 2012, v. 112, 345-349
- Dzantiev B.B., Byzova N.A., Urusov A.E., Zherdev A.V. Immunochromatographic methods in food analysis. // Trends in Analytical Chemistry, 2014, v. 55, p. 81-93
- Shleev, S; Tkac, J; Christenson, A; Ruzgas, T; Yaropolov, AI; Whittaker, JW; Gorton, L. Direct electron transfer between copper-containing proteins and electrodes. // Biosensors & Bioelectronics. 2005, v. 20, p. 2517-2554
- Shleev, S; Jarosz-Wilkolazka, A; Khalunina, A; Morozova, O; Yaropolov, A; Ruzgas, T; Gorton, L. Direct electron transfer reactions of laccases from different origins on carbon electrodes. // Bioelectrochemistry. 2005, v. 67, p. 115-124
- Rusanov A.L., Savitsky A.P. Fluorescence resonance energy transfer between fluorescent proteins as powerful toolkits for in vivo studies. // Laser Physics Letters. 2011, v. 8, № 2, p. 91-102
- Kuzminov F.I., Karapetyan N.V., Rakhimberdieva M.G., Elanskaya I.V., Gorbunov M.Y., Fadeev V.V. Investigation of OCP-triggered dissipation of excitation energy in PSI/PSII-less Synechocystis sp. PCC 6803 mutant using Non-Linear Fluorimetry. // Biochim. Biophys. Acta (Bioenergetics). 2012, v. 1817, 1012-1021.